Tachysurus vachellii: 132837982
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Entry
132837982 CDS
T09596
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132837982 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132837982 (smarcd1)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132837982 (smarcd1)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132837982 (smarcd1)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132837982 (smarcd1)
PBAF complex
132837982 (smarcd1)
GBAF(ncBAF) complex
132837982 (smarcd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
FtsA_C
Motif
Other DBs
NCBI-GeneID:
132837982
NCBI-ProteinID:
XP_060714027
LinkDB
All DBs
Position
22:complement(7528301..7548463)
Genome browser
AA seq
516 aa
AA seq
DB search
MAARGGFQQAASGGGGGGAMGPGPPVPGGGGPGMAPGTPAGRMGPAGPQNPMYRSPMPGP
GYPRPGMPPANRMTPQGPPMGPPGYSASPVPRPGMPVMDPSRKRPAPPQLPQQVQQQQNR
NQHAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQK
RKLRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKS
LVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDP
RLARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQ
RLHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAG
LDNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRA
EFYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcgaggtggtttccaacaagcggcttctggaggcggtggaggcggcgcaatg
ggaccaggacctccggtaccgggtggaggaggaccgggtatggctcctggaactcctgcg
ggaaggatgggaccagcaggaccgcagaatccaatgtatcgctccccgatgcctgggcct
ggatacccgagacccgggatgcccccagcaaaccggatgactcctcaaggcccacccatg
ggtcctccaggctacagcgctagtccagtacctcgccctggaatgccagtcatggaccca
tcacgcaagaggcctgcgccacctcagctgccacagcaggtccagcaacaacagaaccgc
aaccaacatgccaagaagaagaagatggctgataaaattctacctcagagaatcagagag
ctagtccccgagtctcaggcttacatggatctgctagcctttgagaggaagctggatcaa
accatcatgcgcaagagactcgatatccaggaggcactgaagagacccatcaagcaaaaa
cgaaagctgcgtatttttatctccaacactttcaaccctgccaagcctgacgccgaggat
ggtgagggaactgtggcatcatgggagctgcgagtggaaggacggctgctcgaggacact
gctgtatctaaatacgaggccaccaagcagaaaaggaaattttcctctttcttcaagtct
ttagtgatcgaattggacaaagacctctatgggcctgacaatcatttggtagagtggcac
agaacacccactactcaggagactgacggctttcaggtgaaaaggcccggagacgtggga
gtgcgctgtaccgtcctcctcatgctcgactaccagcctcctcagttcaagctggacccc
agactggcacgcatgctgggcatccatacccagaccagacccgtcatcatccaggctctg
tggcagtacgtgaagacgcacaaactgcaggacccacatgagcgcgagttcatcaactgc
gacaaatacctccagcagatctttgagactcagaggatgaagttttctgagattcctcag
cggctgcacgccctgctgatgcctcccgaaccgatcatcatcaaccatgtcataagcgtg
gacccgaatgaccagaagaaaacggcttgctacgatatcgacgtcgaagtagacgataca
ctcaagacccagatgaactcttttctgctgtccactgccagtcagcaggagattgcaggc
ttggataacaagattcacgagaccatcgagaccatcaatcagctgaagactcagagggag
tttatgctgagctttgcccgtgatcctcagggctttatcaacgactggctgcagtcccag
tgcagggacctcaagaccatgaccgatgtggttggaaaccctgaagaagagagaagagcc
gagttctatttccagccatgggctcaagaggctgtgtgtcgctacttctattccaaggtc
cagcagaggagacaggagctggagcaagcactgggcatcaggaacacataa
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