Tachysurus vachellii: 132838091
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Entry
132838091 CDS
T09596
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
tvc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132838091 (ddx19b)
03015 mRNA surveillance pathway
132838091 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132838091 (ddx19b)
Enzymes [BR:
tvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132838091 (ddx19b)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132838091 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
132838091
NCBI-ProteinID:
XP_060714206
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All DBs
Position
22:complement(13882560..13892145)
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AA seq
479 aa
AA seq
DB search
MATDSWAQAVDQQEAAAESISNLQLNEKEDKPKAEENGAKPEGEGEKTEEEDKEDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLKGVYAMGFNRPSKIQE
NALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNKWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVKLMYAIRGNKLERGVKLQEQIVIGTPGTVLDWCQKLKFIDPKKINVFV
LDEADVMIATQGHQDQSIRIQRMLPKSCQMLLFSATFEESVWHFATRIVPDPNIIKLKRE
EETLDTIKQYYVLCNNKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIDRFRNGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSRFSMNVLNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctacggattcctgggctcaggctgtggatcaacaagaagctgcagctgagtcgata
agcaaccttcagttaaatgaaaaggaagacaaacccaaagcagaggaaaatggagccaaa
cctgaaggagaaggagagaagactgaagaggaagataaagaggacaaagctgcccagtca
ctgctgaacaagttgatacgaagcaatttggtgaacaccactaaccaagtggaggttctt
cagagggatccgaactctccgctttactcagtcaagtcgtttgaggagctgcgattgaag
cctcagttacttaaaggtgtttatgccatgggcttcaacagaccctccaaaatccaggag
aacgctttgcccatgatgcttgcagaaccgccacagaatcttatagcacagtctcagtca
gggaccggtaaaactgctgccttcgtcctggccatgctcagtcacgtggatcccaacaac
aaatggcctcagtgcctgtgtgtgtcgcctacatacgagctcgccctccagacgggcaag
gtcatagagcagatgggcaaattttaccccgaagtcaagctgatgtatgcgatccgagga
aacaaactggagagaggggtgaagctccaggagcagattgtgatcggtaccccgggtacg
gtcctggactggtgtcagaagctcaaattcatcgacccgaagaaaattaacgtgttcgta
ctggatgaggcggacgtcatgatcgccacacagggtcaccaggaccaaagtatccgcatc
caaaggatgttgcccaaatcctgccagatgctcttgttctcagcgacgttcgaggagtct
gtgtggcacttcgccacgcggatcgtccctgacccaaacatcatcaaactgaagagggag
gaggagacgctggacaccattaagcagtattacgtgttgtgcaacaacaaggaggagaag
tttcaagccctctgtaacatctacggtgccatcacaatcgcacaggccatgatcttctgt
cacaccaggaaaacagcaggctggttagcaggagagctgtctagggagggtcaccaggtg
gcgttactgagcggagagatgcaggtggaacagagggcagccgtgatcgatcgtttccga
aacggcaaagagaaagtcctggtcactacgaacgtctgtgccagaggtatcgatgtggag
caggtctctgtggttattaatttcgatttacctgtggataaggacggaaaccctgacaac
gagacgtacctgcaccggatcgggcgcacgggcagatttggcaaaagaggcctggcgatc
aacatggtggacagtcggtttagcatgaacgtcctcaaccgcattcaggagcacttcaat
aagaaaatcgaaaaactggacacggacgatttggacgaaatcgagaaaatagcgaactga
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