Tachysurus vachellii: 132838243
Help
Entry
132838243 CDS
T09596
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132838243 (chd5)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
132838243 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
DUF1087
PHD
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
PHD_2
DEAD
AAA_22
Motif
Other DBs
NCBI-GeneID:
132838243
NCBI-ProteinID:
XP_060714467
LinkDB
All DBs
Position
22:3951967..4002758
Genome browser
AA seq
1986 aa
AA seq
DB search
MPGSLSNEEEGQDDLDFEDDVPDEDEETEHVRVPLSPLERFFSEDESLKQKKKKPSKQKE
GRMPKVKKKTKEGGSSEHEDVTDREDQCSGSESSTYGMLKKKKKKPREKKEKKGKWKKRD
DDEDDDDDDGNMKEPKSSSQLMEEWGLEDVQYAFSEDDYKTITNYKAFSQFLRPLIAKKN
PKIPMSKMMTVLGAKWREFSANNPFKGSSATAVAAAVAAAVETVNITPSISISSVQQLSP
TGQVKKAKTKEGKGPSARKKSKQPKDTKKKAKAKKPKLKAGQSSKRKKASSSEDDFLDDF
SDFDDISIHSASVRSDASGVPKKKTKRGRKKRKREDGDGYETDHQDYCEVCQQGGEIILC
DTCPRAYHLVCLEPELEKAPEGRWSCPHCEKEGIQWEAKDDDEEEEDAAGEEEDDHMEFC
RVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQKILHWMWGD
PPLPPEPLSIQDGKKEDVLVKPPLKGRPERLLFVKWAGLSYWHCSWVSELQLELYHTVMY
RNYQRKNDMDEPPPFDYGSGEEELNNEKRKSKDPHYAAMEERFYRYGIKPEWLIIHRILN
HSFDKDGDVHYLIKWRDLPYDQCTWEIDDFDVPEYESYKQAYWDHREQMLGEDHRPLVVR
KGKRLKEEVKRREAPPETPVVDPTVKFEQQPWYIDATGGTLHPYQLEGLNWLRFSWAQGT
DTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVT
YTGDKDSRAVIRENEFTFEDSAVKSGRKVFRMKKDTPVKFHVLLTSYELITIDQAILGSI
SWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFN
NLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKY
YKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNLL
VKSSGKLTLLQKMLKKLKDNGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLR
QEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
NKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEE
LFKDDVEAIGDSKDGEEGSVIHYDDNAISKLLDRSQDATEDTEIQNMNEYLSSFKVAQYV
VREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDT
SQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVG
GNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLKGKSEKEFRAYVSLFMRHLC
EPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPAGLEL
KKLTESLSSDPNTPVPASPAPTQPSTPVPSDKSESGPIPPEDKDSAEHESTKTAESETSK
ESECYPEKTHEREEQKIGSAEQKSNKESEKKDDSPSESEPSINQTQPVSKQNEQSTNQIT
TGQQSKDLEHTSEKTEKDASLVVKLEDKEPKQAAAHEPKSEDGAENQLNGEKEMRDELDE
SQKDEKNGAKARFMFNIADGGFTELHTLWQNEERVAVSSGKMYDIWHRRHDYWLLAGIVT
HGYARWQDIQNDPRYAILNEPFKTEMNKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAA
YLNMTQDTTHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSD
MKADVTRLPSMLSRIPPVSARLHMSERSILSRLTNREPQPQQPFPQGSFACSSMYNNSFG
GGFRGPAGAAMVNYSQMPLGPYVSVSANGPPAPSSHMDKKSSEVLRDVSPPELKSSKPSD
VICIED
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcactgagcaacgaggaagagggccaagacgatttggattttgaagacgac
gtgccagatgaggatgaggagacggaacacgtccgcgtgccgctctcgcctctggagcga
ttcttctcggaagacgagtcgctcaagcagaagaagaagaaacccagcaagcagaaggag
ggcaggatgcccaaagtgaaaaagaagacgaaggagggtggctcgagcgagcacgaggat
gtgacagacagggaggaccagtgctccgggagcgagagcagcacctacggcatgctgaag
aagaaaaagaagaagcccagagaaaagaaggagaagaagggaaaatggaagaagagggac
gacgacgaagacgacgacgatgacgatggaaatatgaaggaacccaaatcttcgagtcag
ctgatggaggagtggggtctcgaggacgtccagtacgccttctctgaggacgattacaaa
accatcaccaactacaaggccttcagccagttcctcaggcctctcattgccaagaaaaac
cccaaaatcccaatgtccaagatgatgacggtgttaggcgctaaatggcgtgagttcagc
gccaacaacccgtttaaaggcagttcggcgacggccgtagcagctgcagtggcggccgcg
gtagaaactgtcaacatcacgccttcgatctccatcagcagcgtccagcagctctctcca
acagggcaggtcaaaaaagccaaaaccaaagagggcaaagggccgagtgcaaggaagaag
agcaagcagccaaaggacacgaaaaagaaagcaaaagccaagaagcccaaattgaaagca
ggacagagcagcaagaggaaaaaagcgtcttcgagcgaggacgatttcttagatgacttc
tctgactttgatgacatcagcatccacagtgcctccgttcgctccgacgcctcgggggtg
cccaagaagaaaacaaagcgaggacgcaaaaagagaaaaagagaggacggagacggctac
gagacggaccatcaggactactgtgaggtgtgtcaacagggcggtgagatcattctgtgt
gacacctgcccccgggcctatcacctcgtgtgtctcgagcctgagctggagaaagcccct
gagggcagatggagctgccctcactgcgagaaggaaggaattcagtgggaagcgaaggat
gatgacgaggaggaagaggacgctgcaggagaggaagaagacgaccacatggagttctgt
cgagtgtgtaaagacggaggagagctgctgtgctgtgacacatgcccttcctcctaccac
atccattgcctgaacccgcctctgcccgagatccccaacggagagtggctctgcccacgg
tgcatgtgccctcctcttaaagggaaagttcagaagattctacactggatgtggggggat
ccacctttaccccccgagcctctctccattcaggacggtaaaaaggaggacgtcctggtc
aaacctccgctaaagggacgtcctgagagactgctgtttgtgaagtgggcaggtctgtct
tactggcactgctcctgggtcagcgagctacagctggagctctatcacacggtcatgtac
aggaattatcagcggaagaacgacatggacgagcctccgccctttgactacggctcaggt
gaagaggagctcaacaacgagaagcggaaaagcaaagacccgcattacgccgctatggag
gagcgtttctatcgctatggcatcaaacctgaatggctaatcatccaccggatcctcaac
cacagttttgacaaagacggagacgttcactacctgatcaagtggagagatctaccatac
gaccagtgcacctgggagatcgacgacttcgacgtccctgaatatgaaagctataaacag
gcctactgggaccaccgggagcaaatgctgggtgaagaccatcgtcccctagtggtgaga
aaaggaaagagactgaaagaggaagtgaagaggagagaagctcctcctgagactccagtt
gtggatcccactgttaaatttgagcagcagccatggtacatcgatgccacaggaggaact
ctgcacccgtaccagctggagggtttaaactggctacgtttctcttgggctcagggaacc
gacaccatcctggccgatgagatgggactgggcaagacagtgcagacaatagtgttcctg
tactcgctctacaaagagggtcattctaaaggcccgttcctggtcagcgctccgttgtct
accatcattaactgggagcgagaatttgagatgtgggctccggatttttacgtggtgacg
tacacgggcgataaagacagcagggctgtgatccgggagaacgagttcacgtttgaggac
agtgctgttaaatcaggacgcaaagttttccgcatgaagaaagacacacctgtgaagttc
cacgtgttgttgacctcgtatgaattgatcaccattgatcaggctattctgggctccatc
tcttgggcgtgtttggtcgtggatgaagctcatagactgaaaaataaccagtctaagttt
ttcagaattctgaatggctataagatttactacaagctgctcctaaccggaacgccgcta
cagaataatctggaagagttattccatctgctgaacttcctcactcctgagcgttttaat
aacctggaaggatttcttgaggagtttgctgacatttctaaagaagatcagattaagaag
ctgcatgatttgttgggacctcacatgctgcggaggctgaaggccgacgtcttcaagaac
atgccagcaaaaaccgagctgattgtgcgtgtggagctcagccctatgcagaagaaatac
tacaagttcatcttgactcgaaactttgaagctctgaactctaaaggaggtggaaaccag
gtttctcttctcaacatcatgatggacctgaaaaaatgctgcaaccacccgtacctcttc
cctgtggcggccgtggaagcccctgtgttaccgaacgggtcgtatgatgggaacctgctg
gtgaagtcctcagggaaactcactctgcttcagaaaatgctcaagaagctcaaagacaac
gggcatcgcgtccttatcttttcacagatgacgaagatgctggacctgttagaggacttc
ctggagtttgaaggctataaatacgagcgcattgatggcgggataactggaggactgcgg
caggaggccatcgatcgcttcaatgctccgggagcgcagcagttctgtttcctgctgtct
actcgtgctgggggattgggaatcaatctggcaaccgctgatactgtcatcatctacgac
tctgactggaacccacataatgacattcaggcgttcagccgggcacatcgtattggacag
aataagaaagtaatgatctatcgctttgttacgcgggcatcagtggaggaacggattacc
caagtagccaagcgcaagatgatgctcacacacctggtggtgcgtccaggcctgggctcc
aaaacaggatccatgtccaagcaggagttggacgacatcctgaagtttggcacagaggag
ctctttaaagacgacgtggaagccattggagacagtaaagacggagaggaaggcagcgtc
atccactacgatgacaatgccatctccaagctgctggaccgtagccaggacgccaccgag
gacaccgagatccagaacatgaacgaatacctcagctccttcaaggtggctcagtatgtg
gtgcgagaagaggacggagaggaggaggtgcagagggagatcattaaacaggaggagaat
gtggatcctgactactgggagaaactcctgcgccatcattacgagcagcagcaggaggac
ctggcacgcaatctgggcaagggcaagcgcattcgcaagcaggtcaactacaacgacaca
tctcaggaggatcaagaatggcaggacgatctttcagacaatcagtccgagtactcggtg
ggatcagaggatgaggatgaagattttgaggagagacctgaagggggacggcgacagtct
cgcaggcagctgaagagcgaccgggacaaaccgctgcctccactgctagctagagtagga
ggaaacatagaggtacttggttttaatgcacgtcagagaaaggccttcctgaatgccatc
atgcgctggggtatgcctcctcaagacgccttcaactcccactggctggtccgagacctg
aaggggaaaagtgaaaaagagttcagagcatacgtgtcgctgttcatgagacacctgtgt
gagccgggagcagacggagccgagacgtttgcggacggcgttccgagagaaggactgtca
cggcaacacgtcctcacccggatcggtgtcatgtctcttgtgaggaaaaaggttcaagag
tttgagcatgtgaacggcaaatacagcactccagatttgattcctgcaggtctggagctg
aaaaagctcacagagagtctctcttccgacccaaacaccccagtaccagccagtcccgcc
ccgactcagcccagcaccccagtaccatcagacaaatctgagagcggtcccattcctcca
gaagataaagacagcgctgaacacgagagcacgaaaacagccgagtctgagacttccaaa
gaatctgagtgctatcctgaaaagacgcacgagagagaagaacagaaaatcggtagcgcc
gagcagaagtcaaacaaagagagcgagaagaaagacgattcgccctccgaatcagagccg
tcgatcaatcaaactcagccggtatccaagcagaatgagcagtccaccaatcagattaca
acaggacaacaaagtaaggacctggagcacacatcagagaaaacggaaaaagacgcttct
ttggtcgtcaagttggaggacaaagaaccaaaacaagcagctgctcatgagcccaaatct
gaggacggtgctgagaatcagctgaacggagagaaagaaatgagggacgagttggacgag
agccagaaagacgaaaagaacggtgctaaggcacgcttcatgttcaacattgcagacgga
ggctttacggagctgcacacactgtggcagaatgaagaacgtgtggctgtgtcgtccggt
aagatgtatgacatctggcaccggcgccatgattactggcttttggccggcatcgtaact
cacggctacgctcgctggcaggacatccagaacgacccgcgctatgccatcctcaatgag
cccttcaaaactgagatgaacaaaggcaactacctggagatgaagaacaaattcctggca
cggaggttcaagctgttagagcaggcactggtaatcgaagagcagttaagaagagcggct
tacctgaacatgacacaggacaccacacaccctgccatggcgctgaacactcgtttcgcc
gaggtcgagtgtctggccgagtcgcaccagcacctctccaaagagtctctggctgggaac
aagccagctaatgcagtactacacaaagtgttgaatcagctggaggaactgctgagcgat
atgaaggcagacgttacgaggctgccgtccatgctctcccgcattcctcctgtatccgct
cgactccacatgtctgagaggagcatcctgagccgtctcaccaaccgtgagcctcaaccc
cagcagccttttccacagggatcttttgcctgttcttcaatgtacaataacagttttgga
ggaggatttcgaggtcctgctggagctgccatggttaactacagccagatgcccctgggg
ccgtacgtcagtgtgtccgcaaacggtcctccagcacccagcagccacatggacaagaag
tccagtgaggttctgagagacgtgtctccacctgaactcaaatccagcaaaccctcggac
gtcatctgcatcgaagactag
DBGET
integrated database retrieval system
