Tachysurus vachellii: 132838258
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Entry
132838258 CDS
T09596
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132838258 (rnf40)
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132838258 (rnf40)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
132838258 (rnf40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
BRE1
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-RING_UBOX
SpoIIE
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132838258
NCBI-ProteinID:
XP_060714489
LinkDB
All DBs
Position
2:complement(14985403..14997139)
Genome browser
AA seq
1004 aa
AA seq
DB search
MSGTGGKRASGGDSPPGPPEKKMKKEEKTTTTLIEPIRIGGVSSTEEMDMKVIQFKNKKL
LERLEQRQAIEDELREKIEKLEKRQATDDATLLIVNRYWTQLDENVQELLQRVEPKAVPV
PAQTPVSPPASASAPDPATAPLPAPDIPVSLPASLEGEVGLPQPPPPADEEEQQQQSDQQ
LLEQDKEQEQSNAAEKPPEMPVMDGIAAPPPPPPLSESAKAFLTILNISSEEELSLQLQD
RMQFSKSAVACIVCIFDRLHSSIEDLCSRTQAAVIEADSQREVVVTNRSLLEENNKLKDL
ASSLQGRHHKMSLEYNELVDKVTSSETKVTEMETAVEDLQWDIEKLRKREQKLNKHLAEA
LEQLNSGYHASGRSGGLPGGQITLNIQKFESLNAELEQNQELANSRMAELEKLQQELQEA
VRESEKLKMDLRNIPEEVVKETPEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAH
LRQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREM
RHLISSLQNHNHQLKGDVQRYKRKLRETQAEINKMKCQSGDNGSMLTLEESVNDGGLDVK
KEEEDDQDEEEERRRELERQRAREREREVERERERERERERQRSEELKRKDSDTLKMLRT
ELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDELRQRVRELEERERKE
SKKLADEDALRKLRVAEETIEHLQKKLTATKQEEEALLSEMDVTGQAFEDMQEQNSRLMQ
QLREKDDANFKLMSERIKSNQIYKLLREEKEELADQVLTFKTQVDAQLLVVQKLEEKEGI
LQSSLATLEKELALRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLREIQASVLENRSA
RERESGNLKRAQEDLSRLRRKLEKQKKVEMYTDADEILQEEINQYKAKLRCPCCNTRDKE
TVLTKCFHVFCYECLKTRYDTRQRKCPKCNAAFGANDFHRIYIT
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaccggaggtaagcgagcctctggaggggacagtcctccagggccacctgaa
aagaaaatgaagaaagaggagaaaaccaccacgactcttattgaacctattcgcattgga
ggtgtttcttctacagaggaaatggacatgaaggtgattcagtttaagaacaagaagctc
ttggagcgcctcgagcagaggcaggctatagaagatgagctgagggagaaaatcgagaag
ctggaaaaaagacaggcgactgatgatgcgacacttctcatagtcaaccgctattggact
cagctggatgaaaatgttcaagagttactgcagcgagttgaaccgaaggctgttccagtg
cccgcacagacccctgttagtcctccagcatctgcctctgcccctgatcctgcaactgcc
cccttgcctgcccctgatattccagtttctctgccagcttcactggaaggagaagttggc
cttcctcagcctccacctccagcagatgaggaggaacagcagcagcagtctgaccaacag
ctgctggaacaggataaggaacaggagcagtctaacgcagcagagaaaccgccagagatg
cctgttatggatggaattgctgcccctcctccacctcccccattgagcgaaagtgcaaag
gctttcctcaccattctgaatatcagcagtgaagaggagctcagtctgcagctgcaggac
aggatgcagttcagcaaaagtgctgttgcatgcatagtctgcatctttgaccgtttgcac
agcagcattgaagatctctgtagccgtactcaagcggcagtaattgaagccgacagtcaa
cgagaggtcgttgtcacgaatcgcagtctactagaggagaataataaattaaaagatctt
gcttcctcacttcaaggaagacaccacaaaatgtcactggagtataatgaattggttgat
aaagtgaccagctctgagacaaaggttactgagatggagacagctgtagaggacctgcaa
tgggacatcgagaaactacgcaagagagagcagaagcttaataagcacctagcagaggcc
cttgaacagctgaattcaggctaccatgcttctggcaggtctggtggcctacctggtggt
cagattactctcaacatacagaagtttgagtcactaaatgcagagctggagcagaaccag
gagctggccaatagccgcatggcagagctagagaaactgcagcaggagttacaggaggca
gtgcgggaaagtgagaaactcaagatggaccttcggaacattccagaggaggtggtgaag
gaaacaccggagtataagtgtctccagtctcagttctctctgttgtataacgagtctctt
ggagtaaagacacagctggatgaggcccgggctttgctgcttactgccaaaaatgctcac
ctacgccagatagagcacatggagagcgatgagttgtctcttcagaagaagttgcggacg
gaggtcatccagttagaagatacattagctcaagtgcgtaaggaatacgaaatgctacgg
attgagtttgaacagaaccttgcggccaacgaacaagcaggtccaataaacagagaaatg
agacacctaatcagcagccttcaaaaccataaccaccagctcaagggggatgtgcagaga
tacaagaggaagttacgtgagactcaggcagagatcaacaagatgaagtgccagagtgga
gacaatggcagtatgctaacgttggaggagagtgtgaatgacggcggtctagatgtgaaa
aaggaggaagaggatgaccaagacgaagaggaggaaaggagaagagagctggagaggcaa
cgagctcgagaacgtgaaagagaagtggagagggagcgagagagagagcgagaaagggaa
agacagcgcagtgaggagctgaagagaaaagactcggatacactgaagatgctccgaaca
gagctcaaaaaagcacaggagtctcagaaggagatgaagctgctgctagacatgtacaag
tctgcgccaaaagagcaaagagacaaagtacagctcatggcagccgagaggaaatcaaaa
gcagaggtggatgagctgaggcagcgggtccgagagttagaggagagggagaggaaggag
agtaagaagctggctgatgaagatgctctgaggaagcttcgtgtggcagaggagaccatt
gaacatctgcaaaagaagctcacagccactaaacaggaggaggaagccctgctaagtgag
atggatgtgacgggtcaggcttttgaagacatgcaggaacagaacagtcgtttaatgcag
cagctgcgtgagaaagatgatgccaacttcaaactaatgagtgagaggatcaaatccaac
cagatctataaactgttgagagaggagaaagaagaactggctgaccaggtgctcaccttc
aaaacccaggttgatgctcagttgttggttgtgcaaaaactggaggaaaaggaaggcatc
ttacaaagctcactggctactctggaaaaagagttagcactacgcacgcaagctctagaa
ctcaataagcgtaaagcagtagaagcagcgcagctggctgaggacttaaaggtgcaactg
gagcacactcaggccaagctgagggagatccaggcctcagtactggaaaaccgcagtgca
cgtgaacgggagagtggcaaccttaaacgagcacaggaggacttgtcaagactccgccga
aagctggagaaacagaagaaggtggagatgtatactgatgcagatgagatccttcaagaa
gaaatcaatcagtataaggctaagctgcgttgcccctgttgtaacacccgggataaggag
actgtgcttacaaagtgtttccatgtcttctgttacgagtgcttgaagacacgctatgac
acacggcaaaggaaatgtcctaagtgcaatgctgcttttggagccaatgacttccatcgt
atttacatcacttaa
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integrated database retrieval system
