Tachysurus vachellii: 132838300
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Entry
132838300 CDS
T09596
Symbol
sec13
Name
(RefSeq) protein SEC13 homolog
KO
K14004
protein transport protein SEC13
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
tvc04141
Protein processing in endoplasmic reticulum
tvc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132838300 (sec13)
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132838300 (sec13)
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
132838300 (sec13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132838300 (sec13)
04131 Membrane trafficking [BR:
tvc04131
]
132838300 (sec13)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
132838300 (sec13)
Membrane trafficking [BR:
tvc04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
132838300 (sec13)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
132838300 (sec13)
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
132838300 (sec13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
132838300
NCBI-ProteinID:
XP_060714547
LinkDB
All DBs
Position
22:7050782..7056859
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AA seq
320 aa
AA seq
DB search
MVSIMNTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQILVADLRGHEGPV
WQVAWAHPTYGNILASCSYDRKVIIWKEENGTWDKMYKYTGHNSSVNSICWGPYDFGLIL
ACGSSDGAISILTFTGDGQWDIKKINNAHTIGCNAVSWAPAVVPGSLIDQPTGQKPNYVK
RFVSGGCDNLVKLWKEEDGQWKEDQKLEAHSDWVRDVGWAPSIGLPTSTIASCSQDGRVF
IWTCDDPSGNTWTAKLLHKFNDVVWHVSWSITGNILAVSGGDNKVTLWKESVGGQWACIS
DVNKGQGAVNSITDGQQNEQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggtttccatcatgaacaccgtggatacctcccatgaggatatgattcatgatgctcag
atggactactatggcacaagattggcgacctgctcctctgatcgatctgtgaagatcttt
gatgttaagaatggtggccagattcttgtggcagacctgaggggacacgaaggtccggtg
tggcaggtagcctgggcacatcccacctacggcaacattctggcctcgtgctcctatgac
agaaaagtgatcatttggaaagaagaaaacgggacgtgggataagatgtacaagtacaca
ggccacaactcctcggtgaactctatttgctggggaccctatgacttcggtttaatcctt
gcctgcggaagctcagacggtgccatctcgattctgaccttcactggcgatgggcagtgg
gacatcaagaagatcaacaatgcacacactattggctgcaatgcagtaagctgggctcca
gctgttgttcccggcagcctcatagaccagcctacaggacagaaacccaactatgtgaag
agatttgtctctggaggctgtgacaacttggtcaagctttggaaagaggaagatggtcag
tggaaggaggaccagaagctggaggcccacagtgattgggtgagagatgtaggttgggct
ccatctatcggtctacctaccagcacaattgccagctgctcccaggatggtcgtgtgttt
atttggacatgtgatgatccttctggaaacacctggactgccaaactcctgcacaaattc
aacgatgttgtctggcatgtcagctggtccatcacaggcaacatcctggctgtgtctggt
ggagacaacaaggtgaccctgtggaaggagtctgtaggcggacagtgggcttgcattagc
gacgtgaataaaggccaaggggccgtgaactccatcacagacggccagcagaacgagcag
tga
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