Tachysurus vachellii: 132838317
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Entry
132838317 CDS
T09596
Symbol
csf1a
Name
(RefSeq) macrophage colony-stimulating factor 1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04010
MAPK signaling pathway
tvc04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
132838317 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
132838317 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tvc04052
]
132838317 (csf1a)
Cytokines and neuropeptides [BR:
tvc04052
]
Cytokines
CSF and other factors
132838317 (csf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
Sha_B_N
Motif
Other DBs
NCBI-GeneID:
132838317
NCBI-ProteinID:
XP_060714569
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All DBs
Position
22:complement(12253829..12262535)
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AA seq
511 aa
AA seq
DB search
MNTHTTVHKAKIRHLCSCLVLCLHLASGAVPGPCQYSVTEEHLLTLKKLIMNQVQSGCSI
SFKFTERQHLSDVCYIKAAFPHILELLHKHFTYENGSDNYNYTSSLKVLIHNLYSNKCVP
PINEEIEENPETFARLYWSLPREGLKKTEEVFQMYKKLMSENDKAVNWNCEDEYANNVLE
STTVLPTQTTGTTECECSCPHTVNSFLFTTSAPATSPSSPHTQSGAYIFKYNNEESSAPE
PADNVKTPNSTPNQISALSPDPGPFSSLHTKPELIHEESKNFITSSMPNLMDNSSDSSVA
MGGDVQSVTSSPISSTSELTNITTRTDLLSATSQPSEKNNTLLISKRNTVQVLSKRSLDN
RDQGMRSDSSSNLLWTRITETKRIRVNKMVKVLEITPGEIENQPVDHVKQNSPTQLHLHM
DKSLPGNVFKIISKDPNCKDSRCDKSTEDRSDQRSRGLVERHTGEKEYHLVQISVYTAFL
ITAACVLLLFITAICYYKQQRNLQKVRTLYL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacactacagtccacaaggccaagataaggcatctgtgctcctgccttgtc
ctgtgcttgcatttggcctctggtgctgttcctggtccatgtcaatattctgtgactgag
gaacatctcctgactttaaaaaaactgatcatgaaccaagtccaaagtggctgctctata
tccttcaagtttaccgaacgccagcacttgagtgatgtctgttacattaaagcagcgttc
cctcacatcctggaacttttgcataaacacttcacatatgaaaatggttctgataactat
aactacacaagctcactaaaggtgttgatccacaacctttattccaataaatgtgtccct
cctattaatgaagaaattgaggaaaatccagagacgtttgccagactatactggtctttg
cccagggaaggtctaaaaaaaacagaggaggtatttcagatgtacaaaaagctgatgagt
gaaaatgacaaagcagtgaactggaactgtgaggatgagtatgcgaataatgttttagaa
tccaccactgtacttcccacccaaactacaggtaccacagagtgtgagtgctcttgtcct
cacactgtgaattcatttttgttcaccacatctgctccagctacatccccatcatctccc
cacacccagtcaggagcgtacatcttcaagtacaacaatgaagaatctagcgcacctgag
cctgcagacaacgttaaaacaccaaactcaactccaaatcagatttctgcactttcacca
gatcctggtcctttttcaagcctacacaccaaacctgaactcattcatgaggaatctaaa
aatttcattacttcctccatgccaaatttgatggataacagcagcgattcttctgtagcg
atgggaggtgatgtgcaatcagttacatcctctcccatttcatccacaagtgaattaaca
aacataacaacaagaactgatctcttatcagcaacatcacagccatctgaaaaaaacaac
acactgctaatttctaaaaggaacacagtgcaagtactttccaagagatccttagataac
agagatcaaggaatgcgttctgattcctcctccaatctgctctggactcggatcactgaa
accaaaagaattagggtgaataagatggtcaaggtcttagaaatcacacccggagaaata
gaaaaccagcctgttgatcatgttaagcagaacagtcctacacaactccatcttcacatg
gacaagtccttaccagggaatgtgtttaaaatcatcagcaaggatccaaactgcaaagat
tccagatgtgacaagagcactgaagacagatcagatcagagatccagaggccttgtagag
agacacactggggaaaaagagtaccatcttgtgcagatctctgtgtatacagcattcctg
attacagctgcttgtgtattactgctgttcatcactgctatttgctactacaagcagcag
cggaatctacaaaaagtcaggactctatacctatga
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