Tachysurus vachellii: 132838510
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Entry
132838510 CDS
T09596
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
tvc
Tachysurus vachellii
Pathway
tvc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132838510 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132838510 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tvc00536
]
132838510 (shhb)
Peptidases and inhibitors [BR:
tvc01002
]
Cysteine peptidases
Family C46: hedgehog family
132838510 (shhb)
Glycosaminoglycan binding proteins [BR:
tvc00536
]
Heparan sulfate / Heparin
Morphogens
132838510 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
SH3_12
Motif
Other DBs
NCBI-GeneID:
132838510
NCBI-ProteinID:
XP_060714871
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Position
1:13100998..13105898
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AA seq
418 aa
AA seq
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MDLTLLLRKLALVSSVCVLLAGWARACGPGRGYGKRRHPKRLTPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELTPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEAWDEDGNHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSALVYLSDGRTKPVKDLKEGEKVLAADELGNIVYSD
FIAFLDRDVTLHRTFLVLETQKPNVTLRLTAAHLVFVRDDSAASGMVAKFASEVKPGQEV
FVWEGQGRLSSASVERVSVVEDRGTYAPLTAHGTIVVDGVLASCYAAVEAHRWAHWAFAP
FRLSHTLTPTLWWRWMIPDSNATSQQDGIHWYPKMLLHVGMWLLGQDSFHPLGISNSS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggacctgacgctgctgctccggaagctggcgctcgtctcgtccgtgtgcgtactgctg
gccggttgggcgcgcgcctgcggtccgggccggggctacggcaagcgcagacacccgaag
agactgacgccgctagcctacaaacagttcattcctaacgtggcggagaaaacgctggga
gcgagcggaaagtacgagggcaaaattacgcgcaactcggagcgcttcaaggaactcaca
ccgaactacaaccccgacatcatcttcaaggacgaggagaacacaaacgcagaccgactc
atgacccagcgatgtaaagacaagctgaactcattggccatctcagtcatgaaccagtgg
cccggggtgaagctgcgtgtcacagaggcctgggatgaggacggcaaccatttcgaagag
tctttacactatgagggccgagcagtggacattacgacctcagacagagacaagagcaaa
tacggaatgttgtcgagacttgccgtggaagccggattcgactgggtttattacgaatcc
aaagcacacatacactgctctgtcaaagcagaaaattctgtggcagctaaatctggtggc
tgctttccaggctctgcgctggtttacctctcagatggaagaacgaagcctgtcaaggat
ctgaaggaaggtgaaaaggttcttgcagcagatgagctgggaaacattgtgtacagcgac
ttcattgccttcctggaccgggacgtgaccctgcaccggacattccttgtgctcgagaca
cagaagccaaatgtgactctgaggctcacggcggcacacctggtgttcgtccgggacgat
tcggctgcctcagggatggtggcaaagtttgcgagtgaagtgaaaccagggcaggaggtg
tttgtgtgggaaggacaaggacgtctgagtagcgcgagtgtagagcgagtttctgtggtg
gaggacagaggcacgtatgcaccgctcacagcacacgggaccattgtggtggacggtgtt
ctagcatcatgctacgctgctgtggaggcacaccgctgggcgcactgggcttttgcgcca
ttccgcctgagtcacactctcacgccgaccttgtggtggcgttggatgataccggattca
aatgctacctcgcagcaagatgggattcactggtatcccaagatgctgctgcatgttgga
atgtggctgttgggccaagactctttccacccactcgggatttcaaactcaagctga
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