Tachysurus vachellii: 132838539
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Entry
132838539 CDS
T09596
Symbol
smc3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
tvc
Tachysurus vachellii
Pathway
tvc04110
Cell cycle
tvc04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132838539 (smc3)
04114 Oocyte meiosis
132838539 (smc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132838539 (smc3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tvc00535
]
132838539 (smc3)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
132838539 (smc3)
Meiosis-specific proteins
Cohesin complex and associated proteins
132838539 (smc3)
Proteoglycans [BR:
tvc00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
132838539 (smc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
OmpH
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
132838539
NCBI-ProteinID:
XP_060714901
LinkDB
All DBs
Position
23:complement(2536814..2552607)
Genome browser
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTVVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEDEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSSKRETCGDKSRQLRDAQQDARDKVEETERVVRELKARISAMKEEKEQLSSERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELQETEPKFNTVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAINKDL
EDTEANKEKNLEQYNKLDQDLNEVKTRVEELDKKYYEVKNRKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVINGYHGIVMNNF
ECEPAFYTCVEVTAGTRLFYHIVETDEVSTKILMEFNKMNLPGEVTFLPLSKLDVRDTAY
PETNDAIPMISKLRYSPNFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDMRKAEEELTELEAKLNENLRRNIEHINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQRRVDDLNDEIRQLQQDNRQLLNERIKLEGIMTRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELDGINKRVKDTMARSEDLDTLIDKTEVEIKDHIKS
MERWKNIEKEQNEAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
TLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQDELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDAEGSQSQDEGEGGADSERG
SASQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIVELAGHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ISAEQAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacattaaacaggtgatcatccagggcttccgcagttacagagaccagactgtggtt
gatcctttcagctccaagcacaacgtgattgtgggcagaaatggatctggaaagagtaac
tttttttacgctatccagtttgttctgagtgatgagtttagtcacctgcggcctgagcag
cgtctggcccttctccatgagggcactggacccagagtcatctccgcttttgtggaaatt
atattcgacaactcggacaacaggcttccgattgacaaagaggaggtttcactgcgtcga
gtcattggagcaaaaaaggaccaatacttccttgataagaagatggtgacgaagaacgat
gtgatgaacttgttggagagtgcaggtttctcccgcagcaacccttactacattgtaaag
cagggaaagatcaaccagatggctacggctcctgactcgcagcgtctgaagctcctgagg
gaggtggcaggaacccgggtgtacgacgagcgcaaggaggagagtatctcgctgatgaaa
gagacagagggaaagagggagaagatcaacgagctgctgaagtacatagaagagcgactg
cacacgctggaggacgaaaaggaggagttggcgcagtaccaaaaatgggacaagatgagg
agagcgctggagtataccatctacaaccaggagctcaacgagactcgggccaagctcgac
gaactgtccagtaagagagagacgtgtggggacaaatcaaggcagttacgagacgctcag
caggatgccagagacaaagtggaggagaccgagcgagtcgtgcgggagctgaaggctcgt
atctctgcgatgaaggaggagaaggagcagctgagctctgagcggcaggagcagatcaag
cagagaaccaaactggagctcaaagccaaagacctgcaggatgaactggcaggcaacagt
gaacagaggaaacggttgttaaaagagaggcagaagctgttggagaagattgaggagaaa
cagaaggagctgcaggagactgagcctaaattcaatacagtgaaggagaaggaggagaga
ggcattgccaggctggctcaggccactcaggagcgcacagacctgtacgccaagcaggga
cgtggcagccagttcacctccaaagaggagagagacaagtggatcaaaaaggagctgaag
tcccttgaccaggccattaatgacaagaaacggcaaatcgccgccatcaacaaagacctg
gaggacaccgaggccaacaaggagaagaacctggagcagtataataaactggaccaagat
ttgaatgaagtgaagacccgggtggaggagctggacaagaaatactacgaggtgaagaac
aggaaggacgaactgcagagcgagagaaactacctgtggcgagaggagaatgcggagcag
caggccctggcagccaagagagaagacctggagaaaaagcagcagctgctacgtgcagca
acaggaaaggccattctgaacggcatcgacagcattaataaggttctggaacatttccgc
cggaaaggcatcaaccaacatgtcatcaacggataccacggaatcgtcatgaacaatttt
gagtgcgagcccgccttctacacctgcgtggaggtgaccgctggaaccaggttgttttac
cacatcgtagagactgacgaagtaagcacaaaaattctgatggagtttaataagatgaac
ctgcctggagaggtcaccttcctgcccctcagcaagctggacgtccgggacaccgcctac
cctgagactaacgatgccatcccgatgatcagcaaattacgctacagtccaaactttgat
aaagccttcaaacacgtgtttggtaagactcttatatgccgcagtatggaggtttccact
cagctcgctcgagccttcaccatggactgcattactttggagggagaccaggtgagtcac
cgtggtgctctcacaggaggctactacgacacaaggaagtctcgcctggagctccagaag
gacatgcgcaaagctgaggaggaactcactgagctggaggccaaactcaacgaaaacctg
cggaggaacattgaacacatcaataacgagatcgatcagctgatgaaccagatgcagcag
atcgagacgcagcagaggaagtttaaggcctcgcgtgacagcatcctctccgagatgaag
atgcttaaagagaaaaggcagcagtctgagaaaaccttcatgccaaagcaacgtagtctg
cagagtctggaggccagtctacacgccatggagagcacacgggagtccttaaaggccgaa
ctgggcaccgacctgctctctcagctcagcctggaggatcagcgtcgtgtcgacgacctc
aacgacgagatcagacagctgcagcaggataacaggcagctgctgaacgagagaattaaa
ctggagggtattatgaccagggtggagacgtacctgaatgagaacctgcgtaaacgcctt
gaccaagtggaacaggagctgaacgagttgagggagacagaaggaggaaccgtcctcacg
gccactacgtccgagttggacggaatcaacaaacgcgtcaaagacactatggcccggtca
gaggacttggacacgctgatcgataagaccgaagtggagattaaggaccacataaaaagc
atggagcgctggaagaacattgagaaggaacagaacgaggccatcaaccatgacaccaag
gagctggagaagatgacaaaccggcagggcatgctgctgaagaagaaggaggagtgcatg
aagaagatacgcgagctcggctccctgccgcaggaggctttcgagaagtatcagacgctc
acgcttaaacagcttttccgtaagctggagcagtgtaacactgagctgaagaagtacagt
cacgtgaataagaaggctttggaccagtttgtgaacttctccgagcagaaggagaagctg
ataaagaggcaggacgagctggacagaggctacaagtccatcatggagctcatgaatgtc
ctggagctgcgtaaatacgaagccatccagcttacttttaaacaggtgtcaaagaacttc
agcgaggtcttccagaagttagttcctggaggtaaagctactctggtgatgaagaaagga
gacgctgaagggagtcagtctcaggatgagggggagggtggggctgacagtgagagaggc
tccgcctcccagagcagcgttcccagtgttgaccagttcacaggagtcggaatcagagtg
tccttcacaggtaagcagggagagatgagggagatgcagcagctctccggaggtcagaag
tctctggtggcgctggcactcatcttcgctatccagaaatgcgaccctgcccccttctac
ctgtttgatgagattgaccaggctttggatgcacagcacaggaaagccgtgtcagatatg
attgtggagttagcaggtcacgctcagttcatcaccactaccttcagacccgagctgctg
gagtcagccgacaagttctacggagtcaaattcagaaacaaggtgagtcacatcgacgtg
atctccgccgagcaggcgaaggacttcgtggaggacgataccactcatggctaa
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