Tachysurus vachellii: 132838554
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Entry
132838554 CDS
T09596
Symbol
slc8a1a
Name
(RefSeq) sodium/calcium exchanger 1a isoform X1
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
tvc
Tachysurus vachellii
Pathway
tvc04020
Calcium signaling pathway
tvc04260
Cardiac muscle contraction
tvc04261
Adrenergic signaling in cardiomyocytes
tvc04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
132838554 (slc8a1a)
04020 Calcium signaling pathway
132838554 (slc8a1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
132838554 (slc8a1a)
04261 Adrenergic signaling in cardiomyocytes
132838554 (slc8a1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvc02000
]
132838554 (slc8a1a)
00536 Glycosaminoglycan binding proteins [BR:
tvc00536
]
132838554 (slc8a1a)
Transporters [BR:
tvc02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
132838554 (slc8a1a)
Glycosaminoglycan binding proteins [BR:
tvc00536
]
Heparan sulfate / Heparin
Others
132838554 (slc8a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex
Na_Ca_ex_C
Flu_M2
CFSR
Motif
Other DBs
NCBI-GeneID:
132838554
NCBI-ProteinID:
XP_060714924
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Position
23:complement(350247..369681)
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AA seq
964 aa
AA seq
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MGQSDTPCLHHPSLTLFFIFIFHELQHVAAGGSKLHEVSVPANNTESCSGTYECKEGVIL
PLWRPENPSFGDKLARATIYFVAMAYMFLGVSIIADRFMASIEVITSQEKVITIKKPNGE
TTTTTVRIWNETVSNLTLMALGSSAPEILLSVVEVCGHNFDAGDLGPNTIVGSAAFNMFV
IIGLCVSVIPDGDHRKVKHLRVFFVTAAWSIFAYTWLYMILAVFSPGVVEVWEGLLTLFF
FPICVVFAWIADRRLLFYKYVYKRYRVGKQRGMIIETEGEPELQSKTDVEMDRKMLSFLD
GTVDASEEMDEEETRREMARILKELKQNHPEKDMEQLAEIANYQLLSLQQKSRAFYRCQA
TRLMTGAGNILKKHAADQARRALGTYELRSEVSDNDHSSKIFFYPASYQCLENCGSVALN
VVRRGGDLTSMVSVNYQTEDGTANAGSDYKFTEGIIVFKPGETEKEIRVEIIDDDIFEED
EHFLVHLRNVRVLSEGTNHEDSMSNHVDSLAGLGLPSTATVTIFDDDHAGIFMFEEPVMH
VSESIGVMEVKVVRMSGARGVVEVPYKTIAGTAKGGGEDFEDTYGVLEFENDEISKSVQI
NIIDDEEYEKNKNFFMEIGEPRLLEMSERKAVLLHECGGFIKTDKQLFGRDVYRKVQGRD
NPIPSNIITITDEGVKRSLSEKEEEEMRIAELGRPSLGENSRLEVVIEESYEFKSTVDKL
IKKTNLALLVGTNSWREQFVEAIKVNSGGDDDDEECGEEKLPSCFDYVMHFLTIFWKVVF
ALVPPTDYWNGWACFTVSICMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPD
TFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAVFHKWHGNEFKVEPGTLAF
SVTLFTIFAFVCIAVLMYRRRPEIGGELGGPRGAKILTSGLFFSLWLLYIILSSLEAYCF
IKGF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggacaatcagacactccatgcctccaccatccatcactcactctgttcttcatattt
atattccatgagctccagcacgttgctgctggaggatccaagcttcatgaagtttcagtt
ccagctaataatactgaaagctgctcaggtacctatgaatgtaaagaaggagtgatcctg
ccactatggaggccagaaaacccatcgtttggagacaagctggcgagagccaccatctat
ttcgttgctatggcatatatgttcctcggggtctccatcattgcagaccgttttatggca
tccatcgaggtcatcacatcacaagagaaggtaatcaccatcaaaaagccgaacggagaa
accaccaccaccacggtccgcatctggaatgaaaccgtgtccaatctcaccctgatggca
ctgggatcatctgctccagagatcctgctctctgtcgtggaggtttgtggacacaacttt
gacgcaggtgatctggggccgaacaccatcgtgggcagcgccgccttcaacatgttcgtc
atcattggactctgtgtttctgtcatccccgatggcgatcatcgcaaagtaaaacatctc
agagtgttcttcgtcactgcagcttggagcatctttgcttacacctggctctacatgatc
ctggctgtgttttctccaggcgtcgtggaggtgtgggaaggtttactgacactcttcttc
ttccccatatgcgtggtgttcgcgtggatcgctgaccgcagacttctgttctacaaatat
gtttacaaaagatatagagttgggaagcagcgaggaatgattattgagactgaaggagaa
cctgaactccagtcgaaaacagatgttgaaatggacagaaagatgctcagctttctagat
ggaactgtggatgcatctgaggagatggatgaggaggaaaccagaagagaaatggcaagg
attttaaaagaactgaaacagaatcatccagaaaaagacatggagcagctagcagagatc
gctaactaccaacttctcagcctgcaacagaagagtcgagcgttttatcgctgccaggcc
accaggcttatgaccggtgcaggaaacattctgaagaaacatgcagcagatcaggccaga
agagccctcggcacctatgaactacgatctgaggtctcagacaatgatcattcctcaaag
atctttttctatcccgcttcataccagtgtttggaaaactgtggctcagtggcactgaat
gtggtccgacgtggaggtgacctgaccagcatggtttctgtaaactaccaaacagaagac
ggcactgccaacgcgggctccgattacaagttcactgagggcatcatcgtcttcaaacca
ggtgagactgagaaggaaatccgagtggaaatcattgatgatgacatctttgaagaagat
gagcatttcctggtccacctgcgcaatgtcagggttctgtctgagggaacaaaccatgag
gattcaatgtctaatcacgtggacagcctggcaggactgggacttccatccactgccacg
gtgaccatctttgatgacgatcacgctgggatctttatgtttgaggaaccagtgatgcac
gtcagtgagagcatcggggtgatggaggtgaaagtggtgaggatgtctggagctcgagga
gttgttgaagttccatataaaaccatcgctggaacagctaaaggaggaggtgaggacttt
gaggatacctacggagtcctggagttcgagaacgacgagatctctaaatctgttcagatc
aatattatcgatgatgaggagtatgaaaagaacaagaacttcttcatggagattggagag
ccacgattgttggagatgagtgagaggaaagctgtcttactgcatgagtgtggtggcttc
ataaagacagataagcagctgtttgggagagatgtgtaccggaaggtgcagggtagagac
aacccaataccctctaacatcatcaccattacagatgaaggagtgaagcgttctctatct
gagaaggaggaggaggagatgaggattgctgagctgggacggccatctttaggagaaaac
tctcgactggaagtcgtcattgaggagtcctatgagttcaaaagcacagtagataaatta
ataaagaaaacaaacttggctctactggtggggacaaacagctggagagagcagtttgtg
gaggccattaaagtcaactcaggaggtgatgatgatgatgaagagtgtggagaagagaag
ctgccgtcatgttttgattacgtcatgcacttcctgaccatcttctggaaggtggtgttt
gcgttggttcctcccactgattactggaacggctgggcatgtttcaccgtctctatctgc
atgatcggtctgctcacggcttttatcggagatctggcctcacacttcggctgcaccatt
ggcctgaaggactcggtcactgccgtggtgtttgtcgccctcggcacctcggtcccagac
acgtttgcgagtaaagtagcagcgacacaggatcagtatgcggatgcgtccatcgggaac
gtgacgggcagtaatgccgtgaacgtgttcctgggtatcggtgtggcctggtccatcgct
gccgtcttccataagtggcacggtaatgaatttaaagtggaaccgggaacgctcgccttc
tctgtcacactcttcaccatctttgcctttgtctgcatcgctgtgcttatgtaccgccgc
cggcctgaaatcgggggtgagctgggggggcctcgaggggccaaaatcctcaccagtggc
ctgttcttcagcctgtggctcctctacatcatcctgtcctcacttgaggcctactgcttt
atcaaaggcttctga
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