Tachysurus vachellii: 132838575
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Entry
132838575 CDS
T09596
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
tvc
Tachysurus vachellii
Pathway
tvc04136
Autophagy - other
tvc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132838575 (atg13)
04136 Autophagy - other
132838575 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132838575 (atg13)
03029 Mitochondrial biogenesis [BR:
tvc03029
]
132838575 (atg13)
Membrane trafficking [BR:
tvc04131
]
Autophagy
Autophagosome formation proteins
ULK complex
132838575 (atg13)
Atg1 complex
132838575 (atg13)
Mitochondrial biogenesis [BR:
tvc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
132838575 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
132838575
NCBI-ProteinID:
XP_060714951
LinkDB
All DBs
Position
23:5730063..5752679
Genome browser
AA seq
512 aa
AA seq
DB search
MDSDLSPQDRKDLDKFIKFFVLKTVQVIVQARLGEKICTRSSSSPTGSDWFTLAIKDIPE
VTHEAKKALAGQLPTVGRSMCVEISLKTSEGDSMELETWCLEMNEKCEKDIKVSYTVYTR
LSLLLKSLLAITRVTPAYKLSRNQGHDYVILYRIYFGDVQLTGLGEGFQTVRVGVVGTPT
GTLTLSCAYRTNLALMSSRQFERTGPIMGIIIDHFVERPLGNTALMHPCNYRAPGEEEGG
VYAGVEDSQEVCTTSFSTSPPSQLCTSRLSYQTPLLGPVDLCHPTAYTAAAHPHQIAVPG
KEGGVPQVLVQPSHGTQADHGRVPSCPAADVPHPPTSNCSSGDTDVLSRSSEGKNVSPSD
APQTTFTRKVGAFVNKPTTQVTTASLDLPFAAFAPRGYDLEENDPMVQPPASPTSSSPLQ
DSLHSQSSSQSGGQAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLSIDVSA
QSMAEDLETLPEKLAIYEQNIDEFDKFVDTLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgatctgagcccacaggataggaaagacttggacaaattcatcaaatttttt
gtcttgaagacggtgcaggtaatagtacaggctcgtttgggtgagaagatctgcactcgc
tcgtcctcttcccccacaggctcagactggttcaccctagcaattaaagacatcccagag
gtgacccatgaagctaaaaaagctctggccggacagctgcccactgttggacgctccatg
tgtgtggagatttccctgaaaacatcagagggggattcaatggaactggaaacatggtgc
ttggagatgaacgagaagtgtgaaaaggacattaaagtctcctacacggtttacacgcgt
ctgtccctgctcctgaaatctctcctggccatcaccagagttacccctgcttacaaactg
tcacgcaatcaaggccatgattatgtcatcctatacaggatatattttggcgatgtgcag
ttaacaggactgggtgaaggatttcagacagtacgtgtaggagttgtaggtactcctaca
ggaactctcacactttcctgtgcataccgcaccaatctggccctcatgtcctccaggcag
tttgagaggacgggtcccatcatgggcatcatcatagaccactttgtggagcgtccgctc
gggaacacggccctaatgcacccctgcaactacagagctccaggtgaggaagagggaggg
gtttatgctggagtggaggactcgcaggaagtgtgcaccacctccttttccacgtctcca
ccttctcagctttgcacttctcgtctgtcatatcagactcccctcctggggccagtagat
ttgtgccatcctactgcctacactgctgctgcccacccacaccagatagcagttccaggg
aaggaaggtggagtcccacaggtgctggttcagcccagtcatggcactcaggcagaccat
gggcgtgtgccgtcctgccccgccgcagacgtaccacaccctccaacctccaactgcagc
agcggtgatacagacgtgttgtcacgaagtagcgaagggaagaacgtgtccccttcggac
gccccccagacgacctttaccaggaaagtgggagcctttgtcaacaaacccaccacacag
gtgaccactgccagtctggatctgccgtttgctgcgtttgctcccagaggttacgacctg
gaggagaacgaccccatggtacagccgccagcatcacccacctcctcgtctccattacaa
gacagtcttcactcccagagctccagccagagtggaggacaagcacaagatgattttgtc
atggttgactttaaaccagcgttctctaaggacgacctgttgccgatggacttgggcact
ttttacagagagtttcagaatcctccgcagctcacaagcctttccatcgacgtcagcgct
cagtctatggctgaggacttggagactttgccagagaagctggccatctacgagcagaac
atcgatgagtttgacaaatttgtggacacactacagtga
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integrated database retrieval system
