Tachysurus vachellii: 132839008
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Entry
132839008 CDS
T09596
Symbol
lingo1b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1-B isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132839008 (lingo1b)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
132839008 (lingo1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
132839008
NCBI-ProteinID:
XP_060715716
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All DBs
Position
23:complement(9118182..9133318)
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AA seq
622 aa
AA seq
DB search
MTFLQVTSRMVAGVVSGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVLCH
RRKLVALPEGIPIETRLLDLSKNRLKAINPEEFINYPHLEDLQLNENVISVIEPGAFSNL
FGLRTLGLRNNRLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLKELEVGDSE
LVFISHRAFHGLSSLEQLTMERCNMTSVPTEALNHLHTLLVLKLWHFNVNLIRDFSFKRL
YRLKLLEITNWPFLEILTDKSLHGLNITTLSITHCNLTAIPYVAIQHLVYLRSLNFSFNP
IETVEGNKLHNLMRLQVFDLVGGRLVTIEPYSFRGLNYLKVLNISSNSLSTLEESAFHSV
GNLETLALYDNPLACDCRLLWVFRRRWRLNFNKQQPSCLSPEFVQGKEFKDFPDILPSNY
FTCQKSKIRDHKPLQRFVDEGTTVRFACQADGDPTPVIMWQSPRKQFITTKTVGRLSVSL
DGTLEVRYAQIQDNGTYTCIATNAGGNDTKLAHLHVHSYSPNWPHQSNKTFAFISNQPND
SGANDTGRSVQFPFDMKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNAKPNIEIEYV
PRRVEGQTSPTEETHKIRMKMM
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgacatttctgcaggtaaccagcagaatggtggctggcgtggtgagtgggcacagctac
ctggtggcatgctggcagcccattcttatcctgatgctgggcactgtgctgtcgggttcc
actacaggatgcccttcccgctgtgaatgcaatgcccaggagcgctctgtactgtgccac
cgcagaaagctggttgcccttccagagggaatccctattgagacgcgactattggacctg
agcaaaaatcgcttgaaagccatcaacccagaggagttcatcaactatcctcacctggag
gacctgcagcttaatgagaatgtcatctcagtcatcgagccaggtgcatttagtaatctg
tttggattacggacgttaggactgcgcaacaacagactgaagctcattcagctaggtgta
tttactggtttgagtaacctcaccagactggatattagtgagaataaaatagttatcttg
ttggattacatgtttcaggacctttacaatctaaaagaactggaagtgggagatagtgag
ctggtcttcatctctcatagagcctttcatggactcagtagtttagagcagctcaccatg
gagaggtgcaacatgacctccgtgcccacggaggccttaaaccatctccataccctgttg
gtacttaagttgtggcattttaatgtgaacctcattagagatttttccttcaagagactc
tatcggctgaaattgttagagataacaaattggccctttcttgaaatcttgaccgataag
tccctccatggcctcaacattaccacactgagcatcacacattgcaacctcactgccatc
ccctacgtggccatccagcaccttgtctaccttcgctctctcaacttttcattcaatccc
atagagactgtggagggcaacaaactgcacaacctgatgaggctgcaggtattcgactta
gtagggggtcgattggtcactattgagccttactctttcagaggactaaactaccttaag
gttctcaacatttccagcaatagcttgagcactttagaagagtctgcctttcactcagtt
ggtaatcttgagaccctggccctatatgacaaccccttggcatgcgactgccgcttgtta
tgggtttttcgccgccgctggaggctcaatttcaacaagcagcagccatcttgcttgtcc
cctgagtttgtgcaaggaaaagagtttaaagatttcccggatattctcccttcgaattat
tttacttgtcagaaatctaagatccgggaccataaacccctacagagatttgtggatgaa
gggaccacagttcgttttgcatgccaagctgatggggatccaacccctgtgatcatgtgg
cagtctcctcggaagcaattcatcaccaccaaaacagttggacgtctgtctgtgtctctg
gatggcaccctggaagtacgatatgcccaaatacaagacaatggcacctatacatgtatt
gcgaccaatgctgggggtaatgacaccaaacttgctcatctacatgttcatagttattca
cccaactggccccatcagtctaataagacatttgctttcatctccaatcagcccaatgat
agtggtgccaatgacactggtagatcagtccaatttccatttgatatgaagactcttatc
attgctactactatgggatttatttctttccttggagtggtattgttttgtcttgtactc
ctctttctttggagtcgggggaaaggtaatgccaagccaaacatcgaaattgagtatgtg
ccacgtagagtagaggggcaaaccagtccaactgaggaaacccataagatcagaatgaaa
atgatgtaa
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