Tachysurus vachellii: 132839062
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Entry
132839062 CDS
T09596
Symbol
tnrc6ba
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132839062 (tnrc6ba)
03036 Chromosome and associated proteins [BR:
tvc03036
]
132839062 (tnrc6ba)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132839062 (tnrc6ba)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Gene silencing
piRNA pathway
132839062 (tnrc6ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
132839062
NCBI-ProteinID:
XP_060715816
LinkDB
All DBs
Position
2:16251376..16265978
Genome browser
AA seq
2003 aa
AA seq
DB search
MEDKKRKKEDKRKRETSQKVVEQKNKVPELTKTPSTQSPAIPSSVSPSPGPISSTTTSTA
TPAAGAPPQGGNNAKRSAVANGQPSPSAQAPQRYMPREVPPRFRCQQDHKVLLKRGQPPL
SSMLLGGGNSGGDSPNATVAAATDSSLVSGGPAASSLPHTSSSSSIAASSTTTNYANSMW
GVSSGSQPLSQGREKVIVDGSDLEEWPSIAAGDGARTGDKGVSGGADGNGMPNSNASWGE
RQQMKVVGGINEGGKSVSSGSPSPPSSSCSNNECMQPTSVVWGSQGATGVNSVAAGSLPS
VSKASPLSGTECSIGVNCGFPGANFNPNANPSAWPALVPDGAGAAATEGSSTPLQSSTSL
SANNSISVNQASHQHQLHQMQYRDIEPSCREWGGTSLEPGAGPKNTAVMDGGDGDCGSTV
GGDLCASSSSSSTSSSTWRAQPFPANSKTGASRTDAWEGGAGGNSVSADGGNSWGFSGQD
DRGGPVGGSTWGTGTQGAWNGGVGDWGNSSSVGNPGGGNGDGSSSNSSTSGGSAGNPSVS
SSTTSTMTRAWDNQKGSVDGVTGDSNEWGGQGTRGGGGTSSSSGGGNSRNGNQHHGHNRT
PQPPNAEVALQNLLSRPDLDPRVLSNSGWGQTQIRQNVAWDFEGGGTAGGARSAAPSHVP
PFSTVPSTTAPSSSSLHPGQPQNTNLNSNSVLTPQSVSPGEGWDNSSSSSSSSSSLPNRG
PKPAANSIQTPGVSQSDNAVGQLAGGQNKTSGGWGELSPSESQGKGWGSEGQDWRDQVTG
GRSSGWGDVRQQGTQVGGGDEWGKIQDEKGAGGWNEMSKGDGGNWGKRSGSEWAERETKA
RPGNWGDAKDNGGTRVDSEVGTWGSWDEGTPRKAWGAGGTDTAGVGSGGDLCSKANSGWG
GNLHTSQMPNSQSTSLKGQAQQQQQSQPQQSQSLDTGAMQGGWGRQGGPSAPSQSSGWTS
GPIPQISSGPSSSEPSGWEEPSPQSISRKKEIDDGTSAWGDPNNYNYVNYWDKNNGSSGQ
TQPMQTQQQGPPPIAGRVPTSLGNRDMNLSHSSNKGPTVAQSGWGRSSSPSSPCVDNGTA
AWGKPTETSTGWGEPDDSGNASGWGNPSNPIKPVGSKSMQEGWGEREGSVSASRHSSWEE
EDEGGVIWNSAGSQGSSSSYNSGGWGGKKVNKGSVKAGDSWMNPMTRQFSNMGLMGEDTS
GRPLDLAPGPPQDKKIDGDKRGMGLNDYNGEMRKGGRGGGGGVVFRSPGSKELGPAETGP
YYDKQTLPFTNQDGCLGEEGPCSPYSPPTVFKPSPLYNHPNPPRQMGGHIFGSSGGMTQP
RHQPGISPINPTVRAQVPHQFLSPQVPGSVLKQMPPPSGGVGAVGGGVFPPQLSPQHIAM
LSSIYPPHIQFQLACQLLLQQHPQQQQQQQQLLPNQRKFPQNVRQQADPQQLARIMAVLQ
QQRQQQQQVGNVGGSSKLSPSHLGTGSQKMPMSDSLSHPGMGGSVADLHQKSSPTYSGFG
SGVNLSGLELGSIAGGPSLKESGGQQSRFKWMMEGHSPAPSSDDALHKNGPITTSLKRGG
SPYSQYDILAAEGLGGHLQGSSDNWQRTPGNKMGTKTGISSWPPEFQPGVPWKGIQSVDP
ESDPYMTPGSMLSSSAVSSLSDTEHQLLRDNTESNPSLNTLLPSPGAWPYSASDSPLNNA
HNSAKYTEYKPSWPPEPIGHNKPWKTNRNASHLPRPPPGLTNQKQSTVSPWAGGAPRLGR
GWGGSGGSHETRYGSGSAWSDGGASRGSCWLLLSNLTPQIDGSTLRTICMQHGPLLTFHL
GLTQGSALIRYSTRQEAAKAQSALHMCVLGNTTILAEFVSEDEVARYFAHSQGGSTSGGG
PPGAAGSSSVGAVGTVSTGSSGERERAGGGSATTGGGGNGGGVVPAGSSWQSLDGTSGSP
DPVSVQAPGLNIFAQWSNGAGGNGASSNAAGVEPGRQGLWAAMPVGYPSSSLWGSPAVED
RHQMSSPAALLPGDLLGGGSDSL
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaagaaagaagataaaaggaaaagggaaacctcacagaaggtt
gtcgagcaaaaaaacaaagtgccagaactgaccaagaccccatctacccaatctcctgcc
atccccagctcggtctcccccagccctggccctatctcttctactacaacctccactgcc
accccggctgctggtgccccccctcagggtgggaacaatgctaagcggtcggcggtggcc
aacggacagccctcccccagtgcccaggccccacagcgctacatgccccgtgaagtgccc
cctcgattccgttgccagcaggaccacaaagtgctactgaagaggggtcagccaccattg
tcctccatgctgctgggaggaggaaacagtgggggagacagccccaatgcaaccgtggcc
gctgccacagattccagtttggtttctggaggtccagctgcttcctctctgccccacaca
tcatcctcttcatcaatcgctgcttcttctactactacaaattatgcaaattccatgtgg
ggggtgagctctggtagccaacccctctctcagggcagggagaaggtgatagtggatggg
tcagatttggaggaatggcctagtattgctgctggggatggagccagaacaggagataag
ggcgtttctggaggtgcagatggcaatggaatgccaaactctaatgcctcatggggtgaa
aggcaacaaatgaaagttgtgggaggaataaatgaaggtgggaaaagtgtcagttctggt
agcccttccccaccttcatcgtcctgttcaaacaatgaatgtatgcagcctactagtgtt
gtttggggttcccagggagccacaggtgtaaattcagtagcagcaggatcattgccctct
gtatccaaagcctcccctctatcagggactgagtgctccattggtgtcaactgtgggttt
ccaggtgccaactttaaccctaatgccaacccctctgcctggccagccctggtaccagat
ggggctggggcagctgcaacagagggtagctccactcctctccaaagctcaacatcattg
tctgccaacaactctatttctgtgaatcaagcctctcatcagcaccaacttcaccaaatg
caatatagagacatagagccatcctgtagagaatggggtggtacatcactggagccaggt
gcaggaccaaaaaacacagcagtgatggatgggggtgatggagactgtggaagtactgtg
ggaggggatctttgtgcatcttcttcttcgtcttccacctcttcatctacttggagagct
cagccttttcctgcaaattccaaaacgggtgcctcaagaactgatgcatgggagggtgga
gctgggggtaattctgtctctgctgatgggggaaactcatgggggttcagtggacaggat
gaccgaggagggcctgtgggtgggagtacatggggcactggaactcagggagcatggaat
ggaggagttggtgattggggcaattcaagtagtgttggcaatccaggtgggggaaatgga
gatggctcaagcagtaacagcagcaccagtggtgggagtgctggaaacccttcagtttcc
tcctccacaacttcaactatgacaagagcttgggacaatcagaaagggtctgtagatgga
gtaacaggagactccaatgagtggggaggacagggaaccaggggcggaggaggtacctca
tcctccagtggtgggggaaactcaagaaatggcaatcagcaccatggccacaaccgcact
cctcagcctcccaatgctgaagtggccttacagaatctgctcagccggcctgatctggac
cccagagtcctgtccaactcaggatgggggcagacacagatccgtcagaatgtggcatgg
gattttgaaggaggaggaacagcaggtggagccagatctgctgctccaagccatgttcca
ccattttctactgtcccttcaaccactgccccatcctcctcttctctacatcctggtcaa
cctcagaacaccaacctaaactccaattcagtccttacaccccagtctgtctcacctggt
gaaggctgggataacagtagtagtagcagcagcagtagttcctctctgcctaatcgaggg
ccaaagccagctgctaacagtatccaaacccctggtgtttcacaatctgataatgcagtg
ggccagttagcaggggggcagaacaaaacttcaggaggctggggagagttaagtccatct
gagagccaagggaaaggttggggcagtgagggtcaagattggagagatcaggtaacaggg
ggcagatcaagtggttggggagatgttagacaacagggtactcaagtaggaggtggtgat
gagtggggtaaaatacaggatgagaaaggggctggaggttggaatgaaatgagtaaaggt
gatggtgggaactggggcaagagaagtggtagtgaatgggcagagcgggagaccaaagca
agacctgggaattggggagatgcaaaggataatggaggtacacgcgtagactcagaagta
ggtacttggggaagctgggatgaaggcacaccaagaaaagcttggggagcaggaggtact
gacacagctggagttggaagtgggggggacctatgtagcaaggctaactcgggttggggt
gggaatttacacacttcacagatgccaaacagccagtcgacctctctgaaaggtcaggca
caacagcaacaacaatcacagccccaacagtcacagtcactggacacaggggccatgcaa
gggggctggggaagacaaggaggtccttcagccccgagccaaagttcagggtggacctca
gggcccataccccaaatatccagtggccctagcagttcagagccaagtggctgggaagaa
ccgtctccacagtctataagtaggaaaaaggaaatagatgatggaacatctgcctggggt
gatcccaataactacaactatgtcaattattgggacaagaacaatggctcatctggtcag
acacaaccaatgcagactcagcagcagggacctccacctatagcaggaagagtgcctaca
agccttgggaacagggacatgaacctctcgcattcttccaataagggccccacagttgct
cagtctggatggggcagaagcagctctccatctagtccttgtgtggataatggcactgca
gcctggggaaagcccactgagacgtccacaggctggggtgagccagatgactctgggaat
gcgtcaggttggggaaatccctccaacccaatcaagcctgtaggttcaaagtctatgcaa
gaaggatggggtgaaagagaaggctctgtcagtgcctcacgtcactctagctgggaggaa
gaggatgagggcggtgttatttggaacagtgctggatcgcaaggcagtagctcttcatac
aactctgggggctggggaggcaagaaggttaataagggctcagtcaaagctggggactct
tggatgaaccctatgactagacagttttcaaacatggggctgatgggagaggacaccagt
ggccgtcctttggatctagctcctggccctcctcaagataaaaagattgatggagataaa
cgaggtatgggtttgaatgactacaatggagaaatgcgcaaaggagggcgtggaggtgga
ggaggagtagtcttccgttcacctggttccaaagagttggggcctgctgagactgggcct
tattatgacaagcagaccttgcctttcaccaatcaggatgggtgccttggggaggagggg
ccttgttctccatactctccgcccactgtcttcaagccctctcccctctacaaccatccc
aatccccctagacaaatgggtggtcatatatttggaagcagtggtggaatgacacagcca
aggcaccagccagggatatcacccattaacccaactgtgcgagcgcaagtgcctcatcag
ttcctgtcacctcaggtgccaggctctgtgctgaagcagatgcctcctccaagtggtggt
gttggagcagtaggtggaggagttttccctcctcagctgtctccacaacacattgccatg
ctcagcagcatctacccccctcacatccagttccagctggcatgtcagctgcttctgcaa
cagcatccgcagcagcagcaacagcagcagcagcttttaccgaaccagcgaaagttccct
cagaatgtgcgtcaacaagcagacccccagcagcttgcaagaattatggctgtactccag
cagcagaggcaacagcaacagcaggtgggaaatgtagggggaagctcaaaactttcacca
tctcaccttggtactggtagccaaaaaatgcccatgtctgactcgttgtctcaccctggt
atgggaggctcagtggctgacctgcatcaaaaatcttcgcctacatattcagggtttggt
tctggtgtaaatctgtctggtcttgagttggggtccatagctggtggtccaagtttgaaa
gaaagtggcggacaacagtctcgctttaaatggatgatggagggacattcgccagctccc
tcttctgatgatgcacttcacaaaaatggccctattactacttctctgaagagaggaggc
tccccatattctcagtacgatatattggctgctgaaggtttgggtggccatctgcaaggg
tcttcagacaactggcagagaactcctggaaacaaaatgggaaccaagactggaatatcc
agctggcctccagaattccagccaggagtgccatggaaaggcatacagagtgttgatcct
gaatctgacccctacatgacccctgggagtatgctgagttcatctgcagtgtcaagcctc
agtgacactgagcaccagttgctaagagataacacggaatcaaacccctccctaaacacc
ttgctgccttcacctggtgcctggccctatagtgcctcagacagccccctcaacaatgca
cataattcagctaagtacacagagtacaagccaagctggcctcctgagcccattggacac
aacaagccttggaagaccaatcgaaatgcatctcatctaccccgcccacctcctggactg
accaatcagaaacagtccactgtgtccccatgggcaggaggagcaccaagattgggaagg
ggttggggtggatctggaggaagccacgaaaccagatatggatctgggtcagcatggagt
gatggcggagcctcaagggggagttgttggcttttgctgagtaatcttactcctcagatt
gatggttccaccctgcgcactatctgtatgcagcatggtcctctcttgacctttcacctt
ggtctaacccagggcagtgctctgattcgctacagtactcgccaagaagcagccaaagct
cagagtgcactgcacatgtgtgttctgggcaacaccacaatcctggcagagtttgtgagc
gaggatgaggttgctcgctattttgcacattcccagggtggaagcaccagtggaggtggg
ccgccaggagcagcagggtcatccagtgtgggtgcagtaggcacagtgagtactggtagc
tctggagagcgggaaagggcaggaggaggaagtgctaccacaggaggtggtggcaatgga
ggtggagttgtgcctgcaggttctagttggcagagtttggatggtaccagtggctcccca
gatccggtctctgtccaggcaccaggcctgaatatctttgcccagtggagcaatggtgct
ggtggaaatggggcaagcagcaatgcagcaggtgtggagccaggcaggcaagggctatgg
gctgcaatgccagtaggatatccaagcagcagcctttggggatcgccagctgtggaggat
cggcaccagatgagcagccctgcagctctgctacctggagacctgctgggtggtggctct
gactccctctga
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