Tachysurus vachellii: 132839148
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Entry
132839148 CDS
T09596
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
tvc
Tachysurus vachellii
Pathway
tvc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132839148 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132839148 (gspt1)
03012 Translation factors [BR:
tvc03012
]
132839148 (gspt1)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132839148 (gspt1)
Translation factors [BR:
tvc03012
]
Eukaryotic type
Release factors
132839148 (gspt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
132839148
NCBI-ProteinID:
XP_060715948
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All DBs
Position
2:16301017..16308448
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AA seq
564 aa
AA seq
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MDQRDSAPESWEEDDVEAQADTELQSAFIGLNVNAPEFVPSFVPRASPHSTGSHGPDTVT
NMEVSEPVAAVENGETDTGTAESWEEKGEPDEVEAAGGTMEEIGSAREEAQDEMMMEEDE
EMPAPKLPPPLPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPSEMCPWYTGLPFIPHLDSLPNFN
RSTDGPIRLPIVDKYRDMGTVVLGKLESGTISKAQQLIMMPNRHTVEVLSLLSDDVETDD
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaccagagagactctgcgcctgagagctgggaggaggacgatgtggaggcccaagcg
gacaccgaactccagtctgccttcatcggcctcaacgtcaacgcaccagagtttgtaccc
tcttttgtacccagagcgtccccacacagcaccgggtcccacggtccagacacggttacc
aacatggaggtttctgagccagtagctgctgtggagaatggagaaacagatactggcact
gccgagtcgtgggaggagaagggtgaaccagatgaggtggaggcagcaggtggaacgatg
gaggagattggatctgctagggaagaagcccaagatgagatgatgatggaggaggatgag
gaaatgcctgcccctaaacttcctcctcctctcccagatgccccaaagaaagaacatgtt
aatgttgtattcattggacacgttgatgctggcaagtcaacaatcggtggccagatcatg
tatttaaccggcatggtggacaaacggaccctggagaaatatgaaagggaagcaaaagaa
aagaacagggagacatggtatctctcatgggcattagataccaaccaggaggagagagac
aaggggaaaacagtagaagtaggaagagcatattttgaaactgagaaaaagcactttacc
atcctggatgccccgggccataaaagctttgtgcccaatatgattggtggagcctcacag
gctgacctggcagtgctggttatctctgccagaaagggcgagtttgagacaggcttcgaa
aagggtggtcagacccgtgaacacgccatgttggccaaaacagctggagtcaaacacctg
atagtcctcattaacaaaatggacgatcctacagtgaactggagcttggatagatatgag
gaatgtaaagagaaattagtgccatttttaaagaaggtgggctttaatccaaagaaagac
atccactttatgccctgttctggactgacaggagccaacttaaaggagccttctgagatg
tgcccctggtacacgggtttaccatttattccacatctggacagcttgccaaacttcaac
cgatcaactgatggtcccatcagattgcctattgtagataagtacagggacatgggcact
gtggttcttggcaaactggaatcagggactattagcaaagcacaacaacttatcatgatg
ccaaataggcacactgtagaggtactgagcctactgtccgatgacgtagagacagatgac
gcaggacctggagagaacctgaagctccgtctcaaaggcattgaagaagaggagattctt
cctggcttcatcttatgcaatgcagagaatctctgccactcagggcgtacgtttgacgcc
cagattgtcattattgaacacaaatccattatatgtccaggttacaatgcagtccttcat
atccatacttgcatagaagaagttcagataacagccttaatctgtttggtggacaagaag
acaggagagaagagcaagacgcgtcctcgctttgtcaaacaagaccaagtgtgcattgcc
cgtctccgaacagcaggaaccatctgcttagaaacgtttaaagacttcccgcagatgggc
cgtttcactctgagggacgaaggtaaaaccattgctatcggcaaggtgctgaagttggtg
ccagagaaggactga
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