Tachysurus vachellii: 132839204
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Entry
132839204 CDS
T09596
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
tvc
Tachysurus vachellii
Pathway
tvc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
132839204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132839204
03021 Transcription machinery [BR:
tvc03021
]
132839204
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
132839204
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
132839204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Phage_capsid
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
132839204
NCBI-ProteinID:
XP_060716024
LinkDB
All DBs
Position
24:complement(6031174..6048000)
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AA seq
658 aa
AA seq
DB search
MADRGSASQDERLRADSTSTATESSKTAMENGIHRVQAAQTNGLDLQQKPNGQATSAISN
MQAQALLQQLSLTSAQQQQLFLQQAQQILAAAVQQQSAGQQSSTTGANLSASAATPITQI
PLSQPIQIAPQLQPTGLNLQQFVLVQPGQLQPAQFIISPSPQGQTGLLQGLQAQNLLTQL
PQSQAQILQPQPSIALTTQAATPSRKIAAMPSAAPLTTKRVDASLVEEASELEELEQFAK
AFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDA
ENMTSESAVSSPSDMSPGICEGLNRRRKKRTSIDTNIRIALEKSFLEQSQKPTSEEITLI
ADQLNMEKEVVRVWFCNRRQKEKRINPPSSSTINTPIKTVFTNSPSVISSASNTLNASSG
LSLSTASVPNLTLAVLDFLLTSGTTLGPVTSNTATVISLAPAVATPAPPVTSLSLTPSAT
ATLSSAKQELVRTTETGSTIATSTGQFLVSPAGLGGANLAAMAAAAGFNPGIISPSQLTQ
GGALLSLAPASLGNALTPTALMNNTTLATIQALASGGALPITSIDGNGNVLFANTSSGGP
TPNLMTTPVLFNSPLSLLPTGVLSAGGAGGGALNLQVTGDVHQSALPVKSITVASKAQ
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaggctcagcgagtcaagatgagcgcttgagagcagattctacaagcaca
gcaacagaatcaagtaaaactgccatggagaatggaatacacagagtccaagctgctcaa
acaaacggcctggacttgcagcaaaaaccaaatggacaagcaacaagtgcaatcagcaac
atgcaggcacaagccttgctccaacagttgagtctgacttcagcacagcagcagcagttg
tttctgcagcaggctcagcagatcctggcagccgccgtgcagcagcaatccgccgggcag
cagagcagcaccactggagccaacctctctgcttctgctgctacacccatcactcagatc
cctctctctcagcctatccagatagcaccgcagctgcaaccgacgggtcttaacctgcag
cagtttgtgttggtgcagccaggacagcttcagcctgctcagtttatcatctccccctca
cctcaaggccagactggacttctacaaggccttcaagcccagaatcttctgacacaacta
cctcaaagtcaagcccagatcctgcagcctcagccaagcattgctctgactacacaggca
gcaacaccttcacgaaagatcgctgctatgccatctgctgcaccactcacaacgaagcgg
gtggatgcttctctagtggaagaggccagtgaactggaggaactagagcagtttgccaag
gcctttaaacagagaaggattaaactgggctttactcagggagatgttggcttggccatg
ggaaagctgtatgggaatgactttagccagaccaccatctcccgttttgaggccttgaac
ttgagcttcaagaacatgtgcaagctcaaaccattgctggagaagtggctgaatgatgct
gaaaatatgacatcagaatctgccgtttccagtcccagtgacatgtccccaggaatttgt
gagggtctaaatcgacgccgtaagaaaagaaccagcattgataccaacattcgtattgcc
ttggagaaaagctttcttgagcaaagtcagaagcctacttctgaggagataacactgatc
gcagatcagctcaacatggaaaaggaggtggtgagagtgtggttctgtaaccgtcggcag
aaggagaagaggatcaaccctccgagcagcagcacaatcaacacccccatcaaaacggtc
ttcaccaactcgccgtcagtgatctctagtgcgtcaaacacactgaatgccagttcaggg
ctctctctcagcactgcctctgttcccaacctcacacttgctgtgcttgattttctgttg
acctcaggtacaactctaggaccagtcacctcaaacactgcaacagtcatctctttggca
cctgctgtcgccactccagctccgcccgtgacatccttgtcacttactccttctgctaca
gcaactctgtccagtgcaaaacaggaactggtcaggacaacagagactgggtccaccata
gcaacgtcaactggacagtttctcgtgtctccagcagggctgggtggcgcaaacctggca
gccatggcagcggcagcaggatttaacccagggattatatcaccttcacagctaacccag
gggggggcgttactaagcttagcaccagcctcgcttggcaatgctctgactccaacagca
ctgatgaacaacactacactggccactattcaggcccttgcatctggaggggcgctaccc
ataacctctatcgatggaaacggcaatgtgctctttgccaataccagttcaggaggtccc
acgcccaatctgatgaccactcctgttcttttcaactcacccctgtctctgctccccacc
ggtgtgctttcagcaggcggagctggtggcggcgctcttaacctacaggttactggtgat
gtgcaccagagtgctctgccagttaaaagcatcactgtggcctccaaggctcaatga
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