Tachysurus vachellii: 132839211
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Entry
132839211 CDS
T09596
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03420
Nucleotide excision repair
tvc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
132839211 (ercc4)
03460 Fanconi anemia pathway
132839211 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tvc03032
]
132839211 (ercc4)
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132839211 (ercc4)
DNA replication proteins [BR:
tvc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
132839211 (ercc4)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
132839211 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
132839211
NCBI-ProteinID:
XP_060716040
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All DBs
Position
2:16486752..16494501
Genome browser
AA seq
895 aa
AA seq
DB search
MEGLLLEYETEMFLSLFSTDGLLIAAEGLGIDRILLHFMKIYSEEGSLVLLLNTTTPEQE
FFTEQLRAEGVNHLPQTINSDTQNTERYHVYTQGGVLFVTSRILVVDFLTDRIPAHLISG
ILVYRAHKIIESCQEAFILRLYRQKNKTGFIKAFTDKATAFSTGFCQVERVMRNLFVKKL
FLWPRFQASVNTVLDRHRPDVVELHVNLTPAMRAIQSSILDIMNACLKELKRYNPSLEAE
DLSLENTLGRAFEKTIRHYLDPLWHQLGTKTKSLVQDLKILRTLLLYLTQYDCVTFLNLL
ESLRSSQKNFGSNSGWLFLDSSTSMFMNARSRVYHVPESNKKLKVGEVEEKPNASVPLKR
ELVLEQNPKWEALSEVLQEIEKEMSNSEHEPGRVLICASDDRTCAQLKEYIQKGAESLLL
RLYSRTIGKDDRLLVSEKTKQDNSWPRKGVRKEPKGKKPRAKNTKLGPKKQRGSLTLTQM
VEQRKEAELEQMGNSADEGEQEEKQDVNDDVLFNLTSDSYYGVLQEPMTVIHPLKGCSDP
YSLTRVLKEVEPMFVVLYDAELSFVRQLEVYKATRPGKPLRVYFLIYGGSTEEQRYLTAL
RKEKQAFEQLIRDKASMVVPEEREGRGDTNLDLDRSQEPAHAAADTRKAGGQEVVKEPSR
VIVDMREFRSELPSLLHRRGLDIEPVTLEVGDYILTPEICVERKSVSDLIGSLQSGRLYT
QCLAMSRFYRRPVLLIEFDPAKPFSLIGRNDLRQEISANDITSKLTLLTLHFPRLRLLWC
PSPHVTGQLFQELKHARPEPDALTAQAVTAESEMVEDSVDLYNPGPYDFLLRMPGVNVKN
VRGLIKHAASLAELLTLSQEKLSEILGSASNARQLHEFLHNTMDVASVQKNRQMK
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggagggactgctgcttgagtacgaaacagaaatgtttctgagcctcttcagtacagat
ggcttactgatcgcggctgaaggacttggtatcgaccgcattttgttacactttatgaag
atttattcagaggaaggaagtctggtgctgctgctcaacaccaccacacctgaacaggag
tttttcacagagcagctgagagctgaaggagtgaatcatcttccccagactataaacagt
gatacacagaacactgaacgttaccatgtgtacacacaggggggagtgttgtttgtgacc
agccgcatcctggtggtggatttcctcacagacagaattcctgctcacctcatctcagga
atccttgtctaccgtgcccataagatcattgagtcatgtcaagaggcctttatcttgaga
ctgtacagacagaagaacaagactggcttcatcaaagctttcacagacaaggccacagct
ttctctactggcttctgtcaagttgagcgagttatgaggaatctctttgtgaagaagctc
tttctttggcctaggttccaagcctcagtgaacactgtactggacagacacagacctgat
gtggtggagctgcacgtgaatttgactccagcgatgagagccatccagagctccattctg
gacatcatgaacgcctgtttgaaggagctcaagcgttacaacccgagtctggaggcagag
gacctctcgctggagaatacactgggccgtgcctttgagaaaaccattcgccattaccta
gatcccttgtggcatcagctgggcactaagaccaaatctctagtgcaggacctgaagatc
ttacgaactctgttgctctacctcacacagtatgactgtgttaccttcctcaacctgctg
gagtccctgcgttctagccagaaaaactttggcagcaattcaggatggctgtttctggac
tccagcacgtcgatgttcatgaatgctcgtagtcgtgtgtatcatgttcctgagtcaaac
aagaaactcaaagttggtgaagtggaagaaaaaccaaatgcctctgtacctttaaaaaga
gagcttgtgcttgaacagaatccaaaatgggaggcgttgtctgaggtgctgcaggagatt
gaaaaggaaatgagcaactctgagcacgaaccaggccgggtgttgatatgcgcgagtgac
gataggacctgtgctcagctgaaggagtacatccagaaaggtgctgagtcactgctcctc
cgcctttattcacgcactattggtaaagatgatcgtcttctggtgtctgagaagaccaaa
caagataacagctggcccaggaaaggtgtaagaaaggagcccaagggcaagaagccccga
gccaaaaataccaaacttggcccaaagaaacagcgaggctcactgacactcacccaaatg
gtagagcagcggaaagaagccgagctggaacagatgggcaacagtgcagatgagggagaa
caggaggaaaagcaggatgtgaacgatgatgttctttttaatcttacttcagactcctac
tatggtgttcttcaagaacctatgacggtcattcatccgctcaaaggatgctcggatccg
tacagtcttacgagggtgttaaaagaggttgagcccatgtttgtggtgctgtatgatgct
gagctcagctttgtgcgccagctggaggtttacaaagccaccaggccaggcaaacctctc
cgggtgtattttcttatttatggtggttccacagaggagcagaggtatctcactgccctg
cgtaaagagaaacaagcatttgaacagctgataagagacaaggccagcatggttgttcca
gaagagagagaaggcagaggagacacaaacctggacctggatcgtagtcaggaacctgct
cacgctgctgcagacactcgcaaagcaggtggacaagaggtagtcaaagagccctcccga
gtcattgtagacatgcgggagtttcgcagcgagcttccttcacttctgcaccggcgtggg
ctcgacattgagcctgtcaccctggaggtgggagactacatcctgactcctgaaatctgc
gtggaacgcaagagtgtgagtgacctgatcggctcgctgcagagcggacgattatacact
cagtgcctcgccatgagccgcttctaccgccggcccgtgctgctcattgaattcgacccg
gccaagccgttctcgctaattggccgtaacgatctgcgacaggagatctcagccaacgac
atcacctccaaactgaccctgctgactctccatttcccccggctgaggctgctctggtgc
ccatcgccccatgtcaccggacagctctttcaggaactcaaacatgctcggcctgagcct
gatgccctcactgcccaagccgttacagcagagtcagagatggtggaagattcagtagac
ctgtacaacccaggaccttatgacttcctgctccgtatgcctggagtgaacgttaaaaac
gtacggggactcattaaacatgctgccagcctggctgagctcctcactctgagccaggaa
aagctgagtgagattttgggcagtgcaagtaatgccaggcagctccatgaattcttgcac
aataccatggatgtggcttcagttcagaagaacagacaaatgaagtaa
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