KEGG   Tachysurus vachellii: 132839219
Entry
132839219         CDS       T09596                                 
Symbol
cul4a
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
tvc  Tachysurus vachellii
Pathway
tvc03420  Nucleotide excision repair
tvc04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    132839219 (cul4a)
  09124 Replication and repair
   03420 Nucleotide excision repair
    132839219 (cul4a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tvc04121]
    132839219 (cul4a)
   03400 DNA repair and recombination proteins [BR:tvc03400]
    132839219 (cul4a)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvc04147]
    132839219 (cul4a)
Ubiquitin system [BR:tvc04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     132839219 (cul4a)
DNA repair and recombination proteins [BR:tvc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      132839219 (cul4a)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      132839219 (cul4a)
Exosome [BR:tvc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   132839219 (cul4a)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 STAR_dimer
Other DBs
NCBI-GeneID: 132839219
NCBI-ProteinID: XP_060716045
LinkDB
Position
24:complement(5922432..5945149)
AA seq 754 aa
MMAEESRHNKSASFSALVENSNGVTKTPTSKSGTSKKLVIKNFKDRPKLTETYTEDTWLK
LRDAVGAIQNSTSIKYNLEELYQAVENLCSYKVSPMLYKQLRQVCEDHVRAQIHQFREDS
LDSLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHIVGD
SAVQSRTVEGILEQIERERNGETVDRSLLRSLLGMLSDLQVYKESFENRFLIETDRLYAA
EGQRLMLERDVPEYLHHVARRLEEEIDRVISYLDQSTQKPLISAVEKQLLGEHMTAILQK
GLNTLLDENRVTELTLLYQLFSKVKGGLSVLLQFWREYIKSFGGEIVGSPEKDKDMVQEL
LDFKDKMDNVAHGCFQRNEGFINAMKEAFESFINKRPNKPAELIAKYVDSKLRAGNKEAT
EEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGA
AFTSKLEGMFKDMELSKDIMIQFKQYMQNQSEPSNIDLTVNVLTMGYWPTYTPMDVHLPS
EMVKLQEVFKTFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMFNEG
EDFTLEEIQTATGIEKSELGRTLQSLACGKARVLNKNPRGKEVEDGDRFNFNNDFRHKLF
RIKINQIQMKETVEEQVSTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQLKF
PVKPGDLKKRIESLIDRDYMERDKESPNQYHYVA
NT seq 2265 nt   +upstreamnt  +downstreamnt
atgatggcagaagagtctcgacacaacaagagcgcgagtttctcagctctggtggaaaac
agcaacggagtcactaaaacaccgacctctaaatcaggcacctcgaagaaactggtgatt
aaaaacttcaaagacagacccaagcttacagaaacctacacagaagacacatggctgaag
ttgcgcgatgctgtgggtgcgatccagaacagcacatcaatcaaatacaacctggaggag
ctttatcaggcagtggaaaacctttgctcttacaaagtctcgcccatgttgtacaaacaa
ctccgacaagtgtgtgaagatcacgtgcgagcacagatccaccagtttagggaagactct
ctggacagtctgtcttttctgaagaggatgaacagatgctggcaagaccattgcagacaa
acaatcatgatccgtagcattttcctctttctggatcgcacgtacgtcctccagaactcc
ctccttccctccatatgggacacggggctggagctgtttcgcacacacatcgtgggcgac
agcgcagtccagagtcgtacggtagaaggaattttggagcagatcgaacgagagaggaac
ggagagacagtggatcgaagtctcctgcgcagcttattaggcatgctgtcagacctgcag
gtgtataaggagtctttcgaaaacaggtttctgatcgagacggatcgcttgtatgcagcc
gagggtcagaggctgatgttagaaagagatgttcctgaatacctgcaccacgtagcacga
cgactagaggaggagatcgatcgtgtcatcagttaccttgatcagagcactcagaagccc
ttgatctccgcagtagagaagcagcttttgggtgaacacatgactgccattttacagaaa
ggtctcaacacgctgttggatgagaaccgtgtgactgagctgactctgctgtaccaacta
ttcagcaaagtgaagggaggcctgtcagtattactccagttctggagagagtacatcaag
agctttgggggcgagatcgtcggctctccggaaaaagacaaggacatggtgcaggaactg
ctggactttaaggataaaatggacaacgtggcgcacggctgcttccagaggaacgagggc
ttcatcaatgccatgaaggaagccttcgagagcttcattaacaagagacccaacaaacca
gcagagcttattgccaaatacgtcgactccaaactacgcgctggtaacaaagaggccaca
gaagaggagctggagagaatcctcgacaagatcatgattatcttccgctttatccacggt
aaagatgtgtttgaagcattctacaaaaaagacctagcgaagcgcttactggtgggcaaa
agcgcctctgtggatgctgagaaatccatgctgtccaaactcaaacatgagtgtggtgca
gctttcaccagcaagctcgagggcatgttcaaagatatggaactctccaaagacatcatg
atccagttcaaacagtacatgcagaatcagagtgaacccagcaacatcgatctgacggtc
aacgtcctcaccatgggctactggcccacctacacccccatggatgtccatctgccctca
gagatggtaaagctacaggaggtgttcaaaacgttctatctcggaaagcacagtgggcga
aagcttcagtggcagcccacgctcggccatgcggtgcttaaagccgagtttaaagaggga
aaaaaggagctgcaggtttctttattccagacacttgttctgctcatgtttaatgaaggg
gaggattttaccctagaggagatccaaacagctacaggaatagagaagagtgagctcgga
cgcacgctgcagtccctggcatgtgggaaagctcgcgtattaaataaaaatcccagaggg
aaagaagtggaggacggcgaccgcttcaactttaataacgacttcagacacaaactgttc
cgcatcaaaatcaaccagattcagatgaaggagacggtagaggagcaggtgagcaccaca
gagcgggtcttccaggacaggcagtaccagatagatgctgcagtggtgaggatcatgaag
atgaggaagaccctgagccacaacctgctggtgtcagaactctacaaccagctcaaattc
cctgtgaagccaggtgacctgaagaagcgcattgagtccctgattgaccgagactacatg
gagagagacaaggagagccctaaccagtatcattatgttgcctga

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