Tachysurus vachellii: 132839232
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Entry
132839232 CDS
T09596
Symbol
mgrn1a
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04120
Ubiquitin mediated proteolysis
tvc04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132839232 (mgrn1a)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
132839232 (mgrn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132839232 (mgrn1a)
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132839232 (mgrn1a)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132839232 (mgrn1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
132839232
NCBI-ProteinID:
XP_060716071
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Position
2:16541476..16551968
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AA seq
560 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFTSHFFMGGQKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKAETESTAEEAGNAGVLYGV
EFYFDTDARVAITLYCQAFEEFSNGVAVYTSKTPAMASETVCYKRGINQQFSLPSFKIDF
TRWKPEELNFDLDRGVFPLVVHAVVDDGDDVVGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKSVEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNAC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPAGVLSSVPFSPVLSQSSDNTENSNSENIP
PGYEPVSLLEALNGVQPASPALPSAPLYEEVQYSEEIGDPLTLSMKQQSTVELSADPLAL
KSKLSKSPDGSIRSPTSPIQEEEDDEEHLSDLSDAQVRPVRPYSPAPTEATVDGIESDPG
SPNTGSEGMSVGVSVSEILQDCHSVRSSLSRTESDPSADLALPGSSGSIESLKSQSTSSS
IQPLLCLPSSLCIEDEILSP
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgggctcaatacttagtcgaagaattgctggagttgaagacattgatattcaggctaat
tccgcttacagatatcctcccaaatccggaaattatttcaccagtcacttttttatgggt
gggcagaaatttgacaccccccatccagagggatatctgtttggagaaaacatggatttg
aattttttaggaaatcgacctgttcagtttccctatgtgacccctgcacctcacgagcct
gtcaagacactaaggagtctagtgaacatcaggaaagactcgttacggcttgttaggtac
aaagctgaaactgaaagcactgcagaggaagctggaaacgcaggagttttgtatggcgtg
gagttttactttgacactgatgccagggtggccatcacactatactgccaggcatttgag
gagttttctaatggggttgcagtctatacttcaaaaaccccagccatggcatctgagaca
gtctgctataagagagggataaaccaacagttttctctgccgtctttcaagattgatttc
actagatggaaaccggaggagctgaactttgacctggacagaggtgttttccctctggtg
gttcacgcagttgtggatgatggagatgatgttgttggacacgctcatgtgcttttagca
gcttttgaacggcatgttgatggcagtttttcagtgaagcctttgaagcagaagcaaatt
gttgatcgcgtcagctacctactgcaagagatttatggcatcgagaataagaacaaccaa
gagacaaagtctgtagaagatgagaacagtgacaacagcagtgagtgtgtggtgtgcctg
tcagacctgcgcgacacactcattctcccctgcaggcacctttgtctctgcaatgcgtgt
gctgacacactacgttaccaagccaacaactgccctatctgcagactcccctttagagca
ctactacaaatccgtgcggtgaggaagaaacctgcaggagtgctctcctctgtccccttc
agtccggtgctgtctcagagctcagacaacacagagaattcgaactctgagaacatccct
cccggttacgagcctgtatccctgcttgaggccctaaacggcgtgcagcctgcgtctcct
gctcttccctcagcccctctgtatgaagaagttcagtactcagaagaaataggtgaccca
ctgaccctgagcatgaagcagcagagcaccgtggagctcagtgcagatccgctggctttg
aaatccaaactcagcaagtcaccagatgggtctatacgctcccccacatctccaatccag
gaggaggaggatgatgaggagcacctgtctgatctatctgatgctcaggttcgacctgta
cggccctacagtccagctcctactgaggcgacagtagatgggatagaatccgatccagga
tcccctaacacaggttcagagggcatgtctgtgggggtgtctgtaagtgagatcctgcag
gactgccacagtgtgcgcagcagcctgagccgtactgagagtgatccctctgccgacctg
gcactgcctgggtcatcagggtccattgagagtctgaagagtcagagcaccagcagctcc
atccagcctttgctctgcctccccagcagcctgtgcatcgaggacgagatcctcagcccc
tag
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