Tachysurus vachellii: 132839286
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Entry
132839286 CDS
T09596
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132839286 (sorcs3a)
Membrane trafficking [BR:
tvc04131
]
Endocytosis
Others
Others
132839286 (sorcs3a)
Endosome - Lysosome transport
132839286 (sorcs3a)
Endosome - Golgi transport
132839286 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
132839286
NCBI-ProteinID:
XP_060716167
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All DBs
Position
24:complement(8677552..8932292)
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AA seq
1223 aa
AA seq
DB search
MDSYPGMFLTLCTWLFCSLRFCAVTKAEVTCALCPFPVLVKTGDVQNNPRTIIPTAAGKS
LVSFASTRLQPVLEGVHELGKDASANGAPKSIEVEVAARSTGTVYSAKTPPEQTAQGKLG
FDKVGKKDSALLRGKRSVAQLDEFGASTRGGDSAESTDAMLFVDGQKLRRNRDEGKVTTS
RSEEPKVSSSTFALAGDSAHNHAVVYWTGQNSSVILILTKLYDFHLGSVTESSLWRSTDY
GTTYERMNDKVGVKTVLSYLYVCPTNQRKVMVLTDPEFESSILISSDEGASYQKYRLSFY
VLSLLFHPSQEDWALAYSHDQKLYSSFDFGRKWHLVHERVTPNRFYWSVSGLDKEADLVH
MEAYTSDGQCQYMACRAQACYESSRTFPFPGYIEPNSLVVQDEYIVIQVTMSGRAAYYVS
YQRGPFLRIKIPKYSLPKDMHILSTDQGQVFAAVQEWNQNDTYNLYISDPHGVYFTLALE
NVKTTRGLGGNSMIDLYEVSGIKGMLIANRKVENQVKTYITYNKGREWRLLQAPTTDLDG
NEIYCVQPFCSLHLQLQMSENPYVSGSITTKNSVPGVIIAIGNMGSELSYNNVGMFISSD
AGNTWRQIFDEEHNVWFLDKAGALVAVKQPTVPTRHFWISFDEGRQWTHHIFSALPLFVD
GVLVEPGMENQILTFFGHFSDRSEWQLIKIDYKSLFTKRCSEGDYQTWHLHNQGEPCVMG
QKQIFIKRRPGNYCMMGKDTRILSAEPCICRAHDFECDYGYERRGDGNCLPAFWFNPATV
SRSCSQGQNYFNSTGYRKVAANNCTKGVKEMYTARKQQCPNRPPRGLHLTTRDSTLKANM
GSNVTFIVQLEEGDSMRTNIQLDFGDGTAVSYSNLSWTEEGIRHVYRNTGIYRVTAIAEN
SLGSDSSSLYLHVVSPVEHIQLLAPFVVIKNKEVNLTAVVWPSYSRTLTYFWWLGNNTEP
IITLEGSISYLFPLEGTYTVTVQVSSSNTILQDTKQIVVQEFFKSLLLSFSPNLDEANPD
IPEWRHDVGRIIKKAVLQIADIPAEQLLVAVFPGLPTAAELFLLPSKNQSDSRKGSEEDL
EKISEILANALNQNLVEFEMKPGSRVIVYITQLTLAPLVDSIPRHSSSAMLMLLSVVFLG
LAVFLIYKFKRKIPWINIYAEVNQEKEQEMIGTVGQNDTTPKIKLSEFSSPKELMEKDLE
VRVKRGMINVCESTREIPNCTSV
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtatcctggcatgttcttgactctgtgtacttggcttttttgctctttgcgt
ttttgcgccgttaccaaagcggaggtaacttgcgccttgtgcccgtttccagtgcttgta
aaaactggggacgtccaaaacaatccacgcactatcattcccacggctgctgggaaatca
cttgtcagtttcgcaagcacgagattgcaaccggttctggaaggagttcatgagttggga
aaagacgcgagcgcgaacggcgcaccaaagtcgatagaagtggaagtggcagcgcgctca
accggaacggtctacagtgcaaaaacgcctcctgagcaaactgcacagggaaagctggga
tttgataaagtaggtaaaaaagacagtgcgttactgaggggtaaaaggagcgtggcgcaa
ctggatgaatttggcgcaagcacgcgaggcggagattccgcagagtccacggatgcgatg
ctgtttgtggatggacagaaactgcgacgcaaccgcgatgagggaaaagtgaccacctcc
agatcggaggaacccaaagtgagcagtagcactttcgccctggctggagactccgctcac
aaccacgctgtggtttactggaccggacaaaacagcagcgtgattctgatcctgaccaag
ctttatgacttccacttgggcagcgtcactgaaagctccctgtggagatcaacagactat
ggcaccacctatgagagaatgaacgacaaagtgggagtgaagacagtcctgagttacctg
tacgtctgccccaccaaccagaggaaggtgatggtgttgactgacccagagttcgaaagc
agcatccttataagttctgacgaaggagccagctaccagaaataccgtctcagtttctac
gtcctgagtctgctttttcatccttcacaggaggactgggctctggcctatagccacgac
cagaaactgtacagctcgtttgactttggacggaagtggcatctcgttcacgagcgagtg
acccccaaccgcttctattggtctgtaagtggtctggataaggaagccgatctggtgcac
atggaggcgtacacttctgatggacagtgtcagtatatggcatgccgggcccaggcttgt
tatgaatcgagtaggacgttccccttccccggctacatcgagccgaactcgctggtggtt
caggatgaatacatcgtcattcaggtgactatgtctgggagagctgcttattatgtgtct
taccaaagaggaccttttttgcgtatcaaaatacctaaatactcccttccaaaggacatg
cacatcctaagtacagatcaaggtcaggtttttgctgctgtgcaagaatggaaccagaac
gacacgtacaacctgtacatctcagatccgcatggtgtttacttcactctggctttggaa
aatgtcaagaccacacgaggtcttgggggcaacagtatgatagacctgtatgaggtttca
ggaatcaaagggatgctgattgctaatagaaaagtggagaaccaggtaaagacgtacatc
acttacaacaagggtcgagaatggaggctgctgcaggcgcccactacagacctggatggg
aacgagatttactgtgtgcagccattttgttcgctacacctacagctgcagatgtcagaa
aacccttatgtctctggaagtattaccaccaagaactctgtgccaggagttatcattgct
ataggaaatatgggctctgagctttcctacaataatgtaggaatgttcatatcatcagat
gctggcaatacctggagacagatatttgatgaggagcacaacgtttggtttctggataaa
gctggagctctagttgcagtgaaacagcctaccgttcccacaaggcatttctggatcagc
tttgatgaagggagacagtggacacatcatattttctcagccttgcctctgtttgtggat
ggagttctggtcgagccaggcatggagaatcagatcctgacgttttttggacacttcagc
gatcgctctgagtggcagctgatcaaaatcgactacaagtccctgtttaccaaacgctgc
tccgaaggagactaccaaacgtggcacttgcacaatcagggtgagccatgcgtaatgggc
caaaagcagatcttcatcaagcgccgcccaggcaactactgcatgatgggaaaggacacc
aggatcctatcagctgagccttgtatctgtcgagcacatgattttgagtgcgactatggc
tatgagcgtagaggtgatggtaactgcctccctgcattctggttcaatcctgccactgta
tcacggagctgcagtcaaggccagaactacttcaacagcacaggttatcgcaaagtagca
gcgaacaactgcaccaaaggggtgaaagagatgtacacagccaggaaacagcagtgtccc
aatcgcccccctcgaggactgcacctgacaacccgtgacagcaccctcaaagcaaatatg
ggctccaacgtcaccttcatagtccaactggaagagggagactcgatgaggactaatatc
caattggacttcggggatgggacggcagtgtcctactctaaccttagctggacagaggag
gggatcagacatgtttaccgcaacacaggaatctaccgggtcactgccattgccgagaac
agcttgggttctgattccagctccctgtacctgcatgtggtgtctcctgttgaacatatc
cagttgctagctccatttgtagttattaagaacaaggaagtgaatttgactgcagtggtc
tggccctcttactctcgaaccctcacctacttctggtggctggggaacaacacagagcct
atcatcactctagagggcagcatatcctatttgtttccactggaggggacgtacacggta
acggtgcaagtttcatcatccaacaccattcttcaagacaccaaacaaatcgttgttcaa
gaattctttaaatcgctgcttctatctttttctccgaatctggacgaggccaatccggac
atcccggagtggaggcatgacgtaggcaggataattaaaaaggctgtgcttcaaatagct
gatattcctgctgagcagctgctggtggctgttttccctggactcccgacagctgcggag
ctcttcctgcttcccagcaagaaccagtctgacagcaggaaagggagtgaggaggatctg
gagaagatttcagaaatccttgccaatgcattaaaccagaacctggtagaatttgaaatg
aaaccaggatccagagttatcgtctatatcacacagctaacattagctccgctggtggac
tcaatccctagacacagcagttctgccatgctgatgctcctctctgtggtgttcttgggt
ttagccgtcttcctcatttataaattcaagagaaaaattccctggattaatatatacgct
gaggtgaaccaagagaaagagcaggagatgatcggcacagtgggtcagaacgacacaacc
cccaaaattaagctcagtgagttctccagccctaaagagcttatggagaaggatttggaa
gtccgtgttaaacgtggaatgatcaacgtctgtgaaagcacaagagagattcccaactgt
acaagtgtctaa
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