Tachysurus vachellii: 132839302
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Entry
132839302 CDS
T09596
Symbol
sox1b
Name
(RefSeq) transcription factor Sox-1b
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132839302 (sox1b)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132839302 (sox1b)
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GFIT
Motif
Pfam:
HMG_box
SOXp
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
132839302
NCBI-ProteinID:
XP_060716191
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Position
24:complement(10030952..10032690)
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AA seq
343 aa
AA seq
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MYSMMMETDLHSPAPQTNTGAGHTGQNAAGKLSQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLASSAGGGGVTLGMSTAQRLESPAGHGGGAGAASYAHVNGWANGAYTAAAAAA
MMQEAQLAYGQHASAGAAHHHGHHPHHHGHHHPHHQHAASAQPVHRYDMSALQYSPMSNS
PSYVSASPSTYAMQYTQHQSSVSAAAGAVGALGSLVKPEPSSSPPLSGASRAPCPGDLRE
MISMYLPAAEAGDAAVQSRLHALPQHYQTTAAAINGTVPLTHI
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggagacggacttgcattccccggcaccccaaacgaacacgggt
gcggggcacacagggcaaaacgctgcggggaaattgagccaggagcgcgtcaagcgcccc
atgaacgcgtttatggtgtggtcccgcgggcagcggcgtaagatggcacaggaaaacccc
aaaatgcacaactcggagatcagcaagaggcttggggccgagtggaaggtcatgtccgag
gcggaaaagcggccttttattgacgaggcgaagcgcctgcgcgccatgcacatgaaggag
cacccggattacaagtaccggccacgcaggaagaccaaaacgctgcttaaaaaggacaaa
tactcactggctggggggctgctcgcaagttctgccggcggtggcggtgtgactctgggg
atgagcacagcgcagaggttagagagtcctgcgggtcacggtggaggcgcaggggcggcg
agttacgcacacgtgaacggctgggctaacggtgcgtatactgcagccgctgccgcagcc
atgatgcaggaggcgcagttagcctacggtcagcacgcaagcgctggggccgctcaccat
cacggacatcacccgcatcaccatggacatcaccaccctcaccatcagcacgccgccagc
gcgcagcccgtgcaccgctatgacatgagcgcgctgcagtacagccccatgtcgaactct
ccgagttacgtgagcgcctcaccgtcgacctatgccatgcagtacacgcagcaccagagt
tctgtctcggcggcggcgggagccgttggcgcgctcggatcgctcgtgaagcctgagcca
agctctagccctcccctcagcggcgcatcccgcgcaccctgtcccggcgacctgcgcgag
atgatcagcatgtacttaccggcggcggaggctggagacgcggctgttcagagcagactg
cacgcgctgccgcaacactatcagaccactgcagctgccattaacggaaccgtcccactg
acgcacatttaa
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