Tachysurus vachellii: 132839372 Help Entry 132839372         CDS       T09596                                  Symbol pdcd11 Name (RefSeq) protein RRP5 homolog   KO K14792   rRNA biogenesis protein RRP5 Organism tvc  Tachysurus vachellii Brite KEGG Orthology (KO) [BR:tvc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:tvc03009]     132839372 (pdcd11) Ribosome biogenesis [BR:tvc03009]  Eukaryotic type   90S particles    Other 90S particles     132839372 (pdcd11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  S1_RRP5 S1 Spt6_S1 HAT_PRP39_N OB_RRP5_4th HAT_PRP39_C HAT_Syf1_CNRKL1_N Suf TPR_19 TPR_14 OB_RRP5 HAT_Syf1_CNRKL1_C ARM_TT21_5th DUF7017 TPR_12 NRDE-2 TPR_16 TPR_CcmH_CycH Motif Other DBs NCBI-GeneID:  132839372 NCBI-ProteinID:  XP_060716290 LinkDB All DBs Position 24:complement(8063765..8090534) Genome browser AA seq 1821 aa AA seqDB search MAAEEDFPRGGAVKKTSEQKTAKTNKFRVEVDNLFETREPVVKKKKKKGVRKDEDENPAK RQKTEGGLKLNTTTSTEILHMKNLKLGTVLLGCVREILNFEVVLGLPSGMKGYMPISSIS DAYTKILSSALDSGTDLEDLVSPAHLLTPGQLVRCVVTTLDLSKQGFVCLRLSINPKDVN KELNSSSLKAGMTLGGCVESVEDHGYLIDIGVSGTKAFLPKDETVTAKKDLKVGQYVTAK LEEVKNEGRVVRLSVNPTVVNQTCAETNHGWTLSNLLPGLLVQVCIRKVTTHGLIVTFLS NYTGLVDFMHVDPDKLATYKVGDEVKARVLYVDPSSRLVGLSLRSYLLSPGGGMLDIVTN ERTGEVLKGCKMTAVHHQSGAMMELPDGTTAFVHKSHLKESKGEFNPNRLLAQPEHTLRI LDYSPMEQIYMATLRKAVIEMPFFSYQDIKAGQTVQGTVLSLEKYGLHVKITDHIKGLVP RIHLADIILTNPEKKYKEGMRIKCKVLSVDPQNKKITLSRKKALMESPLPVFLTYRDARV GLVSHGFIVCIKDFGCIVRFLGEVKGLVPTSELTSEPCDNPQGLFYIGQVVKAKVLKCDA DKEKLLLSFKAVTARDIEKVQRVKFNFEFGKKVEVIVQKKSQTCLEVSILPEDMPALLPT PHLSDHMSNCSLLWTALQEGDTISNVVCLRRDKESIILSKKPSVIVALEAENLVSSFSEL QVGTEMLGWVKSIMSYGVFVDFPHGLFGLAPKATMSDKFVTDTAGVFEVGQTVLAKVTNL DEEKRRFLISLKVSDVSWSENDAKARLIQGQSERTSVYDAMTSRGDSDLLQQLSSVSLGD KLKMTVDVTREDGSVVLTSDQLSYATVLASKYHVADVNTTPGNQVTAVVLHVDFLTSEVH VSLLPDLTVKKKKLTADSQHTATVQYMDKDFAVISLGNTGHLTVILTSDHLNETFSSDSE KLTVGRNVTVSVTDPCCEHLGGRALVVKQAKSSASRNRGGVHKYKPGDFVTAKIKTIKPL CVLVTLPDGVTGSVHVSQISESPKVGGFPTSSLKVGAEVKGRVIGARDIHNHRFLPISHP NFVFSQPELTLLPSKLDDSIPAASLENKPDPQSFKSGQEVMCYVSKYVQKSKCLEVAVFP NIFGFVDLLAMITKPKEAKHPQKLYKHGQCVSAKVVTINPKKPNQLKLSFTGTHTLEKGV VTMGMVWKKIPHVGLILNLPFGNFGMARITDLSDEYVDAPFEQYKEGQMVRCCVVGEEGG KFQLSLRMSRIRTGKALKVKDVDVGSVSELQEGQIIRGYVKNVGEKGIFVRLSRSVTGRV LFQHATNYFAVDSDVFPQHVSQNALLTTKVLHIDAKTGHVDLSLLPEDTGKPDILPESLG LPLRLRGKDKEEHDKKNAAKKRKMAENLQKEGGPQKKLKKEENDAESKKKKLAKEKETTN SQAEDQDSGVEVYFREKGTEKKDKAKKKGKSAAAASETPSRLQVASDFSWDVALSSLKPV TSAQNVYESSDDEQEDSKTTKKSRQEAKLERKEAELKLSKREAELMEPSARPESAEAFER LLLSSPDSSLLWLQYMAFQLQATQIEQARAVAERALKTISFREEQEKLNVWVALLNLENM YGTEESLQKVFERAVQYCEPIPVYQQLADIYTKSNKIKEAEHLYKNMVKRFRQEKAVWQS YGSFLLRQGQSDAANALLQRALQSLSNKEHVDLIVKFARLEFQYGNEERAKAMFEKVLSS YPKRTDLWSVFIDLMMKHGSQNDVRALFDRVVHLSVSVKKVKFFFKRYLDYEKIHGTPES VQAVKQKAMEYVETKGTDAAN NT seq 5466 nt NT seq  +upstreamnt  +downstreamnt atggcggcagaagaagatttccctcgtggtggagcagtgaagaaaacatctgagcagaaa actgctaaaactaacaagtttcgagtggaagtggacaatctcttcgagactcgagagccg gtagtgaagaagaagaagaagaaaggtgtgagaaaggatgaagatgaaaatccagccaaa aggcagaaaactgaaggtggtctgaagctgaacacaacgaccagcacggagatcctgcat atgaagaatctgaagctgggcacggtgctgctcggctgtgtgagggagatcttaaacttt gaagttgtgctcggtctccccagtggaatgaaaggctacatgcccatctcgagcatttct gatgcctacacgaagatcctgagcagcgcgctggactctgggacagacctcgaggatctt gtgtcccctgcccacctcctcaccccggggcagttggtcagatgtgtggtgacgacgctg gatctgtccaagcagggctttgtctgtctcagactgtccatcaaccccaaagacgtcaac aaggagctgaactccagctctctgaaagcaggcatgactctcggtggctgtgtggagagc gttgaggatcacggttacctgatagacatcggagtgagtggaaccaaagcttttctgccc aaagatgaaactgtcacagcaaaaaaagatctgaaggtgggtcagtacgtgacggccaag ctggaggaggtgaagaacgagggaagggtggtgcggctttctgtcaatcctactgtggtt aatcaaacctgcgcagagacgaatcacggctggacgctgagtaacctcttacctgggctg ctggtccaagtctgcatcaggaaggtaacgactcacggcctgatcgtaacattcctctca aattataccggcctggtggacttcatgcacgtcgaccctgataaattggccacgtacaaa gtcggggacgaggtgaaagctcgtgtcctgtatgtggacccgtcgtctcgtctggtgggt ctttccctgcgcagctacctcctatcaccagggggcggtatgttagacatcgtgacgaat gagagaacaggggaggtgctgaagggctgcaagatgactgctgtacaccaccaatccgga gccatgatggagctgccggacgggaccacggccttcgtgcacaaaagccatctgaaagaa tccaaaggggaatttaacccaaaccgactcctcgctcagcctgaacacacactgagaata ttagactacagcccaatggagcagatctacatggccacgctgcgcaaagcagttatcgaa atgcctttcttcagctatcaggatattaaagcaggacagacagtccagggcacggtgctg agcctggaaaagtacggcttgcatgtgaaaatcacagaccacattaaaggcctcgttcct agaattcacctggcggacatcatcctcaccaaccctgaaaaaaagtacaaggaaggcatg aggatcaaatgtaaagttttatcagtggacccccaaaataaaaagatcactctgagcagg aaaaaagctctgatggagtctccgctgcccgtgttcctgacgtacagagacgctcgtgtg gggctcgtctcccacggcttcatcgtctgcatcaaggattttggttgcatcgtaagattt ttaggcgaggttaagggcctggtgccgacgtccgagctgacctcggagccctgcgacaac ccacagggtcttttttacataggacaggtggtgaaagccaaagtgcttaagtgtgacgct gacaaggagaaactgctcctgtcctttaaagcagtgaccgcgagagacatcgagaaggtc cagcgtgtcaagttcaactttgaattcggaaagaaagtggaagtgattgtacaaaagaaa tcccagacttgtcttgaagtgtctattctcccagaagacatgccggctctgcttcccaca ccgcacctctctgaccacatgtccaactgctctctgctgtggacggcgctccaggaggga gacaccatctcgaacgttgtgtgtctgagacgagacaaagaaagcatcattctcagtaag aagccgtctgtgattgtggctctagaggcagaaaacttggtatcgtccttctcagagctg caggtggggacggagatgctgggctgggtgaagagcatcatgtcctacggcgtctttgtc gacttccctcacggcttgtttggcctcgcacccaaagctactatgagcgataagttcgtc acagacactgcaggagtgtttgaggtcgggcagacggtattagccaaggtgaccaacttg gatgaggagaaacgtcggtttttgatcagcctgaaggtgtcggacgtgagctggtcagag aacgacgccaaggccagactgatccagggtcagagcgaaagaacgtccgtgtacgacgcg atgacctcgagaggcgactcggacttgctgcagcagctctcgtctgtttcgctcggggat aaactgaagatgaccgtggacgtgacacgagaggacggctcggtcgtcctgacctcagat cagctcagctacgccacagtgctggcctccaaataccacgtagcagatgtcaacaccact ccaggcaatcaggtcaccgctgtagtgcttcacgttgactttttgacctctgaagtccat gtgtcccttctgcctgatctcacggtgaagaagaaaaagttaacagctgactcccagcac accgctacagtccagtacatggacaaagactttgccgtaatctcattgggcaacaccggt cacctgactgtgattttgacatccgaccacttaaacgaaacgttcagctctgattcagaa aagctgaccgtgggtcgtaacgtaaccgtgagcgtaaccgacccgtgctgtgaacatctg ggtggacgagccctcgtggttaaacaagccaaaagcagcgcttctcggaaccgaggcgga gtgcacaaatacaagcccggggactttgtgacggcaaagattaagaccataaaacctctg tgtgtactcgtaactttgccggatggagtcacgggcagcgtgcatgtttctcagatcagt gaatcgcccaaagttggaggattccccacgtcgtccctgaaggtcggggctgaagttaag ggcagggtcattggtgctcgtgacatccacaaccacaggtttctccccatcagccacccc aactttgtcttctctcagcctgagctcacgcttctccccagtaaactggacgatagcata cctgcagcgtcactggagaacaagcctgacccacagagctttaaatctggacaggaggtc atgtgctatgtatctaaatacgttcagaagtcaaagtgtctcgaggttgccgtgtttccg aacatttttggatttgtggacttgctggctatgatcactaaacctaaagaggcaaagcat ccacaaaagctctacaaacacggccagtgcgtctccgctaaggtcgtcacgatcaacccc aaaaagccaaaccagctcaaactttcctttacagggacgcacactctcgagaagggggtc gttaccatgggtatggtgtggaaaaaaatcccccacgtgggcttgattctgaatctgccg ttcgggaatttcggcatggcacgtatcaccgatttatcagacgagtacgtggacgctccg tttgagcagtacaaagaaggccagatggtcagatgctgcgttgttggtgaagaaggcgga aagttccagttgtctctgcgtatgtccaggatccgcaccggaaaagctttgaaggtgaaa gacgtggacgtcggctccgtctcagagctccaggagggtcagatcatccgaggttatgta aagaacgttggagaaaagggcatcttcgtgaggttatccagatcagtcacaggaagagtc ctgttccaacacgccacaaactactttgcagtcgactccgatgtgttcccgcagcacgtc tcccagaatgcactgctgaccaccaaagttctccacattgatgcaaagaccggtcacgtg gacctctccttgctcccagaggacacgggaaaaccagacattctcccagaatccctcggg ctcccactgcgcctgaggggaaaggacaaggaggagcacgacaagaagaacgctgcaaag aagcgcaagatggctgagaacctgcagaaagaaggcgggccacagaagaaactaaagaaa gaagaaaacgatgcagagagcaagaaaaagaagttggcgaaggaaaaagagacgacgaac tcgcaagctgaagatcaggacagtggagtcgaggtgtattttagagaaaagggcacagag aaaaaggacaaagcaaagaaaaaaggtaaaagtgcagctgcggcttcagaaacgccaagc aggctacaggtagcatctgatttctcctgggacgtagcgctgagttctctcaaacctgta acttcggcccaaaacgtgtacgagtccagcgatgacgagcaggaagacagcaagactacc aagaagtcccggcaggaggcgaagctggaacggaaggaagcggagctgaagctcagcaaa cgtgaggcggagctcatggagccctcggcgcgaccggagagcgcggaggctttcgagcgg ctgctgctctcgtcaccagactcgtctctgctctggctacagtacatggcgttccagcta caggccacacagatcgagcaggcgcgagctgtagccgagagagccctcaaaaccatctcc tttagggaggagcaggagaagctgaacgtgtgggtcgctctgctcaacctggagaacatg tacggtactgaagagagccttcaaaaagtgtttgagcgagccgttcagtactgtgagccc atacctgtgtaccaacagctggcagatatttacaccaagtccaacaagatcaaggaagcc gagcacctttataagaacatggtgaagcgcttcaggcaggagaaggccgtgtggcaaagt tacggctccttcttgctgcgtcagggacagagcgacgctgccaatgctctcctccagagg gcgctgcagagtctgtccaataaagagcatgtggacttgatagtcaaatttgctcggttg gaattccagtacgggaacgaagagcgagccaaggccatgtttgaaaaagtcctgagcagc taccccaaacgcacagacttgtggtccgtcttcatagacctgatgatgaagcacggctca cagaacgacgtcagggccctgtttgatcgcgtggtccacctgagtgtatcggtgaaaaag gttaagttcttcttcaagcgctacctggactacgagaagatacacggcacaccagagagc gtccaagcggtcaagcaaaaagctatggagtatgtggagaccaaagggactgacgccgct aactag

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