Tachysurus vachellii: 132839379
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Entry
132839379 CDS
T09596
Symbol
si:ch211-199f5.1
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvc04515
]
132839379 (si:ch211-199f5.1)
Cell adhesion molecules [BR:
tvc04515
]
Cadherins
Protocadherins
132839379 (si:ch211-199f5.1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
FctA
TMEM154
Motif
Other DBs
NCBI-GeneID:
132839379
NCBI-ProteinID:
XP_060716303
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All DBs
Position
24:6676846..6680648
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AA seq
990 aa
AA seq
DB search
MGGNAGCHRWMFFFTLLSLPLLPARAAGRTMKYETYEEDAPGTIIGNLAKDMSLSPSVGS
KTNFRMMKQVNASFVRLRESDGQLTVGEKIDRERICKHSHQCVIAFDVVSFTKDQFKLIH
VEVEVKDINDNAPEFPRKESTLEISENTAAGTRIPLDVAVDEDVGTNYIQSYQISVNSHF
SIDVLSRADGVKYAELVLMKELDRETQALYALELVATDGGSPPRSGITKINVKVKDYNDN
SPIFERNHFSVEIPEDAPVGFLLLDLNAEDPDEGLNGEVVYGLGNQVPSEIKQLFRVDRK
SGRVTLESPMDYESKTTYEFDVQASDLGQSPSPPAICKVVIQVKDVNDNAPEITITPMTS
MAAGVAHVTEAAAKDTFVALISTSDRDSGVNGQVHCTLYGHDHFRLQQAYEDSYMIVTTS
PLDREKIAEYNLTVVAEDLGSPPFRTITQYTVRLTDENDNAPIFSKATYEVSLIENNAPG
AYITTVVARDSDMGQNSKVGYKLAETYVMGSPVSTFVSLDPATGSLYALRSFNYEVLKQL
ELRVHASDSGAPPLHGTATITLRLVDQNDNAPVIVHPVLTNGSVDILLPKDAPSGYVTTQ
IKARDADEGINAELSYQMISSEASMLSINKVSGEIYVNREGVYDLGETFKATVTVSDHGR
PSLTSTATIRFTVVAGAPKGDRNLFRNAGNDDEVHEWDLSVVIIVVLAGSCTLLLLAIIL
IATTCNKRKLDKRHDGFGDDKEDDVNLDVEKNNSDPLIPVHSENVFDVQPYSNKPAFNGS
VQAANDECCSSEDGIDAAYETEDKSHGAKLDGYLTLPGYGKEAVRPITIWKGNSYTTISA
RDPQFSGKDSGKGDSDFNDSDSDISGDGLKKDGHQNSTQDALWACTSECRILGHSDRCWS
PNATRMNSNSRQHLSTFAKTGSLPRDTLRRENYYQAHIPKTVGLQSVYERVLHQEYVIVP
PPQPSRVQDINDVSIPVYSPTTSHCSTNEV
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgggtgggaatgcaggatgtcaccggtggatgttctttttcaccttgttgtcattgcct
ctgctgccagcgcgagcagcgggaagaaccatgaaatatgaaacgtacgaagaggacgca
ccgggcactattatcggaaacctggccaaggacatgtctttaagtccgtccgtcggctcc
aagactaatttcaggatgatgaagcaggtcaacgcttcttttgttcggcttagagaaagc
gacgggcagctcactgtaggagagaagattgacagagagagaatttgcaaacactctcat
cagtgtgttattgccttcgatgtggtgagttttactaaagaccaattcaaactgatacat
gtcgaggtggaggtgaaggacattaatgacaatgcgcccgagttccccaggaaggagtct
acactggaaatttctgaaaacacagcagccggtaccagaatacccctagatgtggcggtg
gatgaagacgtgggcacgaactacatacaaagctaccagatctcagtgaatagtcacttt
agtattgacgtgttgagcagagcggatggggttaaatatgcggagctggtgctaatgaaa
gagctggacagagagacacaggctttatacgcgctggagcttgtagcgacggacggtgga
agtccgcccaggtccggcataaccaagatcaacgtcaaggtgaaggactacaatgacaac
agtcctattttcgagcgcaaccacttttcagtagaaataccagaggacgctccagtggga
tttctgcttttggatctcaacgcagaagatcctgatgaaggtttgaacggcgaagtggtg
tacgggctcggtaaccaagtgccctcagagatcaagcaacttttccgcgtagaccggaaa
agcgggcgcgtcacgctcgagagcccgatggattacgagagcaagacgacgtacgagttc
gatgttcaggcgtctgacctgggtcagagtccgagtccgccggccatctgtaaagtggtc
atacaggtgaaagacgtgaacgacaacgcgcctgagatcaccatcacgccgatgacgtcc
atggcggcgggagttgcgcatgtgaccgaggcagccgccaaggacactttcgtggctctt
atcagtacttcagaccgggactcaggagtcaacggccaggtacactgcaccctctatggg
catgatcacttccgactccagcaggcgtacgaagacagctacatgatagtcaccacatcg
ccgctggatagggaaaaaatcgccgagtataacctgacagtagtggccgaagacctcggc
tcaccaccgttccgcaccatcacacaatacaccgttagactgactgatgaaaatgacaac
gcgcccatattcagcaaagccacctatgaagtgtcacttatagaaaacaacgcaccgggc
gcgtacatcaccacggtagtggcgcgcgactcggatatgggacaaaacagtaaagtgggc
tataagctcgcggaaacctacgtgatgggctctcccgtgtcaacatttgtctctctagac
cccgccactggctctctttacgcgctgagaagttttaactacgaagttctcaagcagctc
gagctgcgcgtccatgcgagtgactctggcgcgccaccgttgcacggtaccgccaccatc
accctcagactcgtcgatcagaacgacaacgctcccgttatcgtacatccagtgctcact
aacggctctgtggacattcttctgcctaaagatgccccgtcgggttacgttaccacgcaa
ataaaggcgcgagacgccgacgagggcattaacgctgagctgtcctaccaaatgatctcg
tccgaagccagcatgctttctatcaataaagtgagcggggagatctacgtgaaccgtgaa
ggtgtttatgacctgggcgagacgtttaaagccacggtaaccgtgagcgaccacggtaga
ccttctctcacgtctacagccacaatccgcttcacggtagttgcaggggctccgaaaggt
gaccgcaacctcttcagaaacgctggtaatgatgatgaagttcacgagtgggatctgtcc
gtggtgatcatcgtcgttctggcaggaagctgcacgctgttgcttttagccatcatttta
atagcgaccacatgcaataagcgcaaactagacaagcggcacgatggattcggagatgac
aaggaggacgacgtgaatcttgatgtagagaaaaataacagtgacccactgatcccagtt
catagtgaaaacgtgtttgacgtacagccttactcaaacaaacctgcttttaacggatcc
gttcaagcggccaatgatgagtgctgcagctctgaagacggaatcgacgccgcgtatgag
acagaggacaaaagccacggagcaaaattagacggatatttaacactgcctgggtatggc
aaagaagctgtaaggccaatcacaatatggaagggcaactcctatacaactatttcagca
cgagatcctcagttcagtgggaaagacagtggcaaaggggacagcgacttcaacgacagc
gattcggacataagcggagatggcctgaaaaaggacggacaccaaaacagcacccaagat
gctctgtgggcatgcacaagcgagtgtaggatcctcggccattccgaccgctgctggagt
ccaaacgccaccaggatgaacagcaactccagacagcatctgtctacatttgctaagaca
ggctcacttccaagggacacactcagaagagagaactattaccaggcacacattcccaaa
acagtgggcttgcaaagtgtttatgaaagagtgttacaccaagagtatgtcatcgttccc
ccacctcagccgagcagagtgcaagatatcaatgatgtctcaatccctgtgtattctccc
actacatcacactgttccacaaatgaagtctaa
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