KEGG   Tachysurus vachellii: 132839538
Entry
132839538         CDS       T09596                                 
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
tvc  Tachysurus vachellii
Pathway
tvc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    132839538 (exosc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvc03019]
    132839538 (exosc1)
Messenger RNA biogenesis [BR:tvc03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     132839538 (exosc1)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     132839538 (exosc1)
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 132839538
NCBI-ProteinID: XP_060716553
LinkDB
Position
24:complement(15096103..15102513)
AA seq 194 aa
MSPMKLCVPGERLCSVEDCISGAGTYQRHGSIYASLAGYVLRRNEGEELPVISVVKETEA
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGVQMVPISWCEMQCPRTHNKE
FRKVARVQPEYLQA
NT seq 585 nt   +upstreamnt  +downstreamnt
atgtcgcccatgaagctgtgtgttccaggtgaaaggctttgcagtgtggaggactgcatc
tctggagcaggcacctatcagcggcacggttccatttacgcctcgctggccggctacgtg
ctcaggaggaacgaaggcgaggagttaccggtgatttctgtagttaaagagacagaagca
cagcttctgcctgacgtcggagccatcgtcacctgtaaggtgactagcatcaacccccgg
tttgctaaagtgcacatcctctatgtgggatctactcctcttaaagacaggttcagagga
accatcaggaaagaagacgtgagagcgacagaaaaggacaaagtggagacgtataagagt
ttcaggcccggtgacatcgtcctcgctaaagtgatctcactgggtgacgtgcagtcgaac
taccttctgaccacggcggagaacgagctgggcgtggtcgtggcccacagcgaggcagga
gtacagatggtccccatcagctggtgtgagatgcagtgtcctcgaacacacaataaagag
ttccgcaaggtggcgcgagtgcagccggagtacctgcaagcgtga

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