Tachysurus vachellii: 132839647
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Entry
132839647 CDS
T09596
Name
(RefSeq) LOW QUALITY PROTEIN: transformer-2 protein homolog alpha-like
KO
K12897
transformer-2 protein
Organism
tvc
Tachysurus vachellii
Pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132839647
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132839647
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvc03041
]
132839647
Protein phosphatases and associated proteins [BR:
tvc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132839647
Spliceosome [BR:
tvc03041
]
Common components
Common spliceosomal components
SR proteins
132839647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
NPR3
Motif
Other DBs
NCBI-GeneID:
132839647
NCBI-ProteinID:
XP_060716719
LinkDB
All DBs
Position
24:complement(11178123..11182557)
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AA seq
300 aa
AA seq
DB search
MHGKFLLCFFCAHLVWIVQESRSRSVSPRGSVKSTSNSPGRSKDGSHRSRSRSKSRSRSR
SKSRSRSRSHRSSRRRHSRSRSRRRHSRSRSYSREYRRSRSHSPMSNRRRHVGNRANPDP
NCCLGVFGLSLYTTERDLREVFSKYGPLASVTIVYDQQSRRSRGFAFVYFENEEDSKEAK
EQANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGGGGGGGGGSGGGGGGGGRQSTS
SSRSRDYYDRGYDRGYDRGYDRYDDREYYKSYRRRSPSPYYGRGGYRSRSRSRSYSPRRY
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggaagttcttgctctgtttcttttgtgctcatttggtttggattgtgcaggag
tcccgctctcggagtgtgagtcccagaggctctgtgaagtcgaccagcaattcaccagga
agatctaaggatggttctcaccgctctcgctcccgatccaaatctcggtccaggtccagg
tcaaagtccaggtccaggtcccgttcacacaggagctctcgacgtcgccattctcgctca
cgctctcgaaggcgccactctcgtagccggtcgtacagccgagagtacaggcgcagtcga
agccactcacccatgtccaatcgcagacggcatgttggcaaccgggcaaaccctgaccct
aactgttgcctgggtgtgttcggcctgagcctgtacaccacagagcgagacctgagagag
gtgttctccaaatatggccccctggccagcgtcaccattgtttatgaccagcaatctcgc
cgctcgagaggcttcgcctttgtctactttgagaatgaagaggactccaaggaggctaaa
gagcaagctaatggcatggagctggatggacggcgtatcagagtggacttttccattact
aagagaccacacacccccacacctggaatttacatgggacggcccacctatggtggtggt
ggaggaggaggaggtggcagtggaggaggtggtggtggaggaggaagacagagtacgtcc
tccagccgctccagagattattatgatcggggttatgaccgtggctacgatcgaggatat
gaccgttacgatgatcgagaatactacaaatcctacaggcgcaggtctccttcaccctac
tacggtcgtggaggatacagatcccggtcccgctcgcgttcctactccccaaggcgctac
tga
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