Tachysurus vachellii: 132839661
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Entry
132839661 CDS
T09596
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132839661 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132839661 (mid1)
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132839661 (mid1)
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132839661 (mid1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
fn3
ANCHR-like_BBOX
zf-RING_UBOX
TRIM_CC
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
PRY
FN3_DSCAM-DSCAML_C
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_3
zf-RING_5
F36G3_coil
Motif
Other DBs
NCBI-GeneID:
132839661
NCBI-ProteinID:
XP_060716742
LinkDB
All DBs
Position
24:complement(6791361..6825284)
Genome browser
AA seq
733 aa
AA seq
DB search
MRLCVVSLSPHSQFGSLGLIIRRHVAAARSREKSIDSCLVLPNFANAIPSTLHLKRMETL
ESELTCPICLELFEDPLLLPCAHSLCFNCARRILVSHCTTGEPADAICAFQCPTCRYAIS
LSPQHGLDALKRNVTLQNIIDRVQRASTSATLLLSSSGHSSPGDSPLGAMTTATAPSSPA
ELVQCQFCEQEPPQCAVKTCVTCEVSYCEECLRATHPNKKPFTGHRLIEPLPDSHLRGLQ
CLEHEEEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALNERYEKLKQTLDSNLSNLIKRS
SELESLMGKLIQTCQHVEVNASRQEGKLMDECDILISIIQDRRQIIGSKIKEGKAVRLRK
LAQQIGNCKQCIERSSALITQADQTLKETDHARFLQTAKSISERVSMATASSQVLIPEIN
LTDTFDTFALDFTREKKMLENLDYLTAPSPPGIREELCTASYDTITVHWTSDDEFSVVSY
ELQYTIFTGQSNIVSLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFIVKAINQAGSRSS
EPGTLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDEISSKKSHGQERFSSHSSYGVIGNV
YIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNPFSWVLCRCNNSWVVRHNSKEMV
IDPSPHLRRVGVLLDYDVGSLAFYDAVSSQHLHTFHITFTQPVCPVFNVWNKCLTVLTGL
PIPDHLEGVEAFD
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaggctctgcgtggtgagcctctcgcctcattctcaatttgggtcgctgggcttgatc
atcaggagacatgtcgctgccgccaggtctcgggagaaatccattgatagctgcctggtt
ctcccgaattttgctaatgccattccttctacgctccacctaaaaaggatggaaaccctg
gagtcggagctgacgtgcccgatctgcctggagctgtttgaggaccccttgctgttgccc
tgtgcccacagtctgtgcttcaattgtgctcgccgaatcctggtctctcactgcaccaca
ggtgagccagccgatgccatctgcgcctttcagtgccccacgtgccgctatgccatttca
ctgagcccacaacacggcctggacgcactcaagcgcaacgtcaccctccagaacatcatc
gaccgtgtccaacgggcttcaacttctgccacacttcttctgtcctccagcggacacagt
tccccaggcgacagccccctaggtgccatgacgactgccactgcaccctcgtcacccgct
gagctggtgcagtgccagttttgtgagcaggaaccgccgcagtgtgctgtgaagacctgc
gtaacatgtgaggtgtcttactgtgaggagtgcctgcgtgccacccaccccaacaagaaa
ccgttcactggacatcgccttattgaacctttgcctgactcacacctcagaggcctgcag
tgccttgaacatgaggaggagaaagtgaacatgtactgtgtcacagacgagcagctcatc
tgctccctttgcaagttggtgggacgtcaccgtgaccaccaggtggcagcgctaaacgag
cgctatgaaaaactaaagcaaacattggattccaacctcagcaatttgatcaagaggagc
agtgagttggagtcactaatggggaagctgattcagacctgtcagcatgtggaggtgaac
gcatcacgacaagaaggaaagctgatggatgaatgtgacatcctgatcagcataattcag
gacagaagacagattattggatccaaaatcaaagagggaaaggcggttcggctgcggaag
ctagcacaacaaattggcaactgcaagcagtgcatagagcgatcgtccgctctcataact
caagcggaccagacgttgaaagaaaccgatcacgctcgcttcctccagactgcaaagagc
atctctgagcgagtctcgatggcgacagcgtcttctcaggtcttgatacctgagattaat
ctgacggacacgtttgacaccttcgcgctggattttactagagagaagaagatgctagaa
aatcttgattacctcacagcacccagtcctccaggcatccgagaggagctgtgcacggcc
tcctacgacactataaccgtgcactggacatctgatgatgaattctcggtcgtttcttat
gagcttcagtataccatctttactggccagtcaaacattgtcagtctctgcaactccgct
gacagctggatgattgtgcctaatatcaagcagaatcactacaccgttcacggcctgcag
agcggcaccaagtacatcttcatcgtcaaggccattaatcaggcaggaagtcgcagcagt
gaacctggaacactcaaaaccaacagtcagccgtttaagcttgacccaaagtctgcacac
aggaaactaaaagtgtctcacgacaacctgacagtggagcgggacgagatatcctcaaag
aagagccacggccaggagcgtttcagcagccatagcagctacggtgtcataggaaacgtc
tatatcgacagtggacgccattactgggaggctctaatcggaggcagcacttggtatgca
gtgggcatcgcctataagtcagcacccaagcatgagtggattgggaagaaccctttttcg
tgggtgctttgtcgttgtaacaactcctgggtggttcgccacaacagcaaagagatggtc
attgacccttcaccacacctgagacgagtcggcgtgctcctggactacgacgtcggctct
ctggctttctacgatgccgtgagctctcagcacctccacaccttccatatcaccttcacc
caacctgtttgccctgtatttaatgtctggaacaaatgtcttacagtcctaacaggtctg
ccaatcccagatcatctggagggtgtagaggctttcgattga
DBGET
integrated database retrieval system
