Tachysurus vachellii: 132839676
Help
Entry
132839676 CDS
T09596
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc00310
Lysine degradation
tvc00514
Other types of O-glycan biosynthesis
tvc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
132839676
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132839676
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tvc01003
]
132839676
Enzymes [BR:
tvc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
132839676
Glycosyltransferases [BR:
tvc01003
]
O-Glycan biosynthesis
O-linked Gal type
132839676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
132839676
NCBI-ProteinID:
XP_060716765
LinkDB
All DBs
Position
24:complement(16467248..16481137)
Genome browser
AA seq
591 aa
AA seq
DB search
MHRGVLLLSGAAALLALAPCWGSFPEERWNPESPLLAPRVLLALLCRNSERSLPHVLGAI
DRLHYPKDRIAVWVATDHNADNTASVLREWLIKVQTLYHYVEWRPQEEPSEYEDEVGPKQ
WTDLRYKHVMMLRQAALETARQMWADYFLLVDCDNLLTNPDVLWKLMKENKTIVAPMMKS
RAAYSNFWCGMTSQGYYRRTPDYMPIRSQERRGCFPVPMVHSTFLLDLRKQASSQLAFYP
PHPDYTWAFDDVIVFAFSARMADVQMFVCNRETYGYIPVPLHTHHSLRDEVDNFLHTLLE
VMVHGSPVDPSGHLSVPHKLPDKLGFDEVFVINLLRRSDRRERMLRTLWEQEITCKIINA
VDGKALNDSQIRALGIRMLPSYSDPYHGRPLTKGELGCFLSHYNIWTEIVERGLQRSLVL
EDDLRFELFFKRKLQKLMQDVEAEGLDWDLIYIGRKRMQVDHPEKPVPNIQNLVEADYSY
WTLGYMISLQGANKLLRVEPLTKMLPVDEFLPIMYNKHPVDDYMSHYDVRDLLAFSAEPL
LVYPTHYTGDPGYISDTETSTVWNNETVHTDWDRQRSEKNQAMHSHATSDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcacaggggcgtgctgctgctctccggcgccgcggcgctgctcgcgctcgccccgtgt
tggggatctttcccggaggagcgctggaaccccgagtctcctctgctggcaccgcgcgtt
ctgctcgcgctgctgtgccgtaactcggagcggtcactcccgcatgtcctcggcgccatc
gaccgcctccactaccccaaggaccgcatcgctgtatgggtggcgacggaccacaacgca
gacaacacggcttcggtccttcgcgagtggctcattaaagttcagactctgtatcactat
gtggagtggagaccacaggaggaacccagcgagtatgaagacgaggtcggaccgaagcag
tggaccgatctacgttataaacacgtgatgatgctacggcaggcagcgctggaaaccgcc
aggcagatgtgggccgactattttctgttggtggactgtgataatcttctcactaaccct
gacgtcctctggaaactgatgaaggaaaataaaactattgtggcaccaatgatgaagtcc
agagctgcgtactccaacttctggtgcggaatgacctctcagggctactacaggcgtaca
ccagactacatgcccataaggagtcaggagaggcgtggctgtttccccgtccccatggtc
cactccaccttcctgctggatctgaggaaacaggcctccagccagctggccttctatcct
ccacacccggactacacctgggccttcgacgacgtcatagtgttcgccttctccgcccgc
atggcagatgttcagatgttcgtgtgtaacagagagacgtatggctacatccctgtcccg
ctgcatacccatcattccttgcgagatgaggttgataacttcctgcacacgctgctggag
gtcatggtgcacggttctccggtggatccctcaggtcatctctctgtccctcacaaactc
cctgataaactgggctttgatgaggtgtttgtgattaacctgctgagacgttcagatcgt
agagagagaatgttgaggactctgtgggagcaggagatcacctgtaagatcatcaacgca
gtggacggcaaagcactgaatgacagtcagatccgtgctttagggatcagaatgttaccg
agttacagtgatccgtatcatggcaggccgctcactaaaggagaacttggctgcttcctg
tctcactacaacatctggactgagattgtagagcggggactgcagagatctctggttcta
gaagatgatttgcgctttgagctcttctttaaaaggaaactgcagaaactgatgcaggac
gtggaagcagaaggactggactgggatttaatttacatcgggaggaagcggatgcaggtg
gatcatccagagaaaccggttcccaacatccagaacctagtggaggccgactattcctac
tggacgctgggctacatgatctcattacaaggagccaataagctgctgagggtggagcct
ctgaccaaaatgcttcctgtagatgagtttctgcccatcatgtacaacaagcacccagtg
gacgactacatgtctcactatgatgtgagggatctgttggcgttctctgctgagccgtta
ctcgtctaccccacccactacacgggcgacccggggtacatcagcgacaccgagacgtcc
accgtgtggaacaacgagaccgttcacaccgactgggaccgacagcgttcagaaaagaac
caagccatgcactcgcatgctacctctgacctttga
DBGET
integrated database retrieval system
