Tachysurus vachellii: 132839867
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Entry
132839867 CDS
T09596
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
132839867 (rims1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132839867 (rims1b)
Membrane trafficking [BR:
tvc04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
132839867 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
132839867 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
IBR
Motif
Other DBs
NCBI-GeneID:
132839867
NCBI-ProteinID:
XP_060717060
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All DBs
Position
24:complement(11536094..11587675)
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AA seq
1465 aa
AA seq
DB search
MAASVGPQGGPRASVPVSMPDLPDLSHLTEEERKIILAVMARQKEEEEKEQAMLKTLHQQ
FESYKEQVRRIGVENKRQQTTHKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGRV
SLRSNNVMWVCNLCRKQQEILTKSGEWFSSGPRGRPLSVAGPEADRDGKLRSRSQAKTGA
NSTSTNNAQPATDRTKGADIMPVSRARSEPPREKKRPVSLHEQNGKVIGRGERRVGSGRQ
PGQASDDRAPGERRDSRRLEKGHSQEYDHSGNTAHPDQKRKKEEEEREQERQRREEEYQN
RYCSDPNLARYPVKPQKEEQEMRMHAKVSKMRQERHHSDMAINEVGLAQDGCETPGTRLS
RRVAGNENRMALLENQRAYSVDRTVGGCAGGGPVPLQKQGHGGSHMSPGGSQDLRDGQDW
GHKGYLEPGSVALLHKTKREKAAESFRKDSSLSSDQSECLRPPPPRAYKPKRGLNKRQMS
ISSSEEEGGSTPEYTSCEDVESISEKGDWDCHPLDPTVWHHPVTWQPSKEGDHLIGRITL
SKRSAMPREAGSLLGLKVVGGKITATGRLGAFITKVKKGSLADVVGHLRAGDEVLQWNGK
ALPGATKKEVYNIILESQSAPQVEIVVSRPIGDTPRIPDKSHPPLESTGSSSIDESHKVD
RPSISVMSPTSPGMLRDLPQDLPGQLLVKLWYDKVGHQLIVNVLQAIDLPSRPDGRPRNP
YVKMYFLPDRSDKSKRRTKTVKKNSEPRWNQTFLYSHVHRRDFRERMLEITVWDQPRAQE
EESEFLGEILIELETALLDDQPHWYKLQTHDASSLPLPQPSPYLPRRHVHTDSPSKKLQT
AERNSREREKYSTLTVPERQAAIQHRSRSVSPHREDQCRGRSRHTHVPMQRSLDEIRQKR
HHSQSPTHYYNNPQQEHRSGDSDYDYSEDSEVLEMHRSIRGGSAECLHTNSDLQPSLDRV
RSASTTCLRPESSFRSPDRERLSGSLNRPVRAKTNKKSIDNDRIQPTSILRGSRWRRDGP
IRPFEHSGLDRAHGGRNSPTESSLSVRRGRQLPQLPAKSSSIEQALAVEERARQLSQIRV
PSYRPGSSASSGHEQDMALKNKRDLYKRSCDNMSARSSDSDMSDVSAVSRASSASRLSSA
SYMSVQSERPHGRISRQVRASAGRNMLKSTSVSGDINTPERTDGSQSDTALGTVGSSSKK
RRSSLNARFVAIVGNRRSRSTSQISQTEASNKKSKGGGTIQRSQETGMAVELQRNMSRQP
SRESNNGSMASYNSEGSPIFPAVRVETQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMV
NKKGKLEVEVIRARGLIQKPGSKSLPAPYVKVYLLDNGAYVAKKKTKIARKTLDPLYQQT
LQFEESPQGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLASNVIGWYKLFPPSSLVDP
TLASLTRRASQSSLDSSSGPGGVRS
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcagttgggccccagggtggcccgcgggcttccgttccggtttctatgccc
gacctaccagacttgagccacctcacagaggaggaaaggaaaataatcctggcggtgatg
gcgcgccagaaggaggaagaggagaaggagcaagccatgttgaagacgcttcatcagcaa
tttgagagctataaggagcaggtaaggaggatcggggtagagaacaaacggcaacaaacc
acccacaaggacgatgccccgacctgtgggatctgccgcaagaccaagtttgcagatggc
tgcgggcacctctgctcctactgccagaccaagttctgtgcccgatgtggtggaagagtg
tctctccgctccaacaatgtgatgtgggtatgcaacctgtgcaggaagcagcaggagatc
cttactaaatctggagaatggttctcatcagggccaagaggcaggcctctgagcgtggcc
ggccctgaagctgaccgggacgggaagctacgttccaggtcacaggctaaaaccggagct
aactccactagcactaacaacgcccagccagccactgaccgaaccaagggagcggacatc
atgccagtctcacgagctcggagtgaacccccacgagagaagaagaggccagtgtcccta
catgagcaaaatggcaaggtcatcggcagaggtgagaggagagtgggatcaggtaggcag
cctggtcaggcttcagatgatcgtgctccaggagaaaggcgagacagcagacgtctggaa
aaaggccattcccaagaatatgaccactctggaaacactgcccaccctgaccagaagcgg
aaaaaagaagaagaggaacgggagcaggaaaggcagcggcgtgaagaggaataccaaaat
cgctactgtagtgaccccaacttggcacgctaccctgtcaaacctcagaaagaagaacaa
gagatgcgcatgcatgccaaagtgtccaaaatgcgacaagaacgtcaccacagtgacatg
gccatcaatgaagtaggtctggctcaagatggttgcgagaccccaggcactcggttaagt
aggagggtggcgggcaatgaaaaccgcatggcactactggaaaaccaacgggcatactct
gtggacaggaccgtggggggttgtgctggtgggggacctgtaccccttcaaaagcagggt
cacggtggttctcacatgagccccgggggctcccaagacctcagggatggacaggattgg
ggccacaaaggctatttggagcctggatcagttgcattgctccacaagaccaaacgtgag
aaagctgccgaaagcttccggaaagattcttccctcagttcagaccagtcagaatgtctc
cgtccacctcctccccgtgcttacaagcccaaacgaggcctcaacaaaaggcagatgtcc
attagtagttcagaagaggaaggagggtccacacctgagtataccagctgtgaagatgtt
gagagcataagcgaaaaaggtgactgggattgccatcctctagatcccactgtatggcat
catcctgttacgtggcaaccatcaaaggagggagatcatttgattggacgcatcactctg
agcaagcgctcggccatgcctcgggaggctgggtctctgctcgggctaaaggtggttggt
ggaaaaattacagcgaccgggagactcggggcgttcatcaccaaagtgaaaaaaggaagt
ctcgcagacgttgtaggccatttacgagctggtgatgaggtgttgcaatggaatgggaag
gcgttgcctggagcaaccaagaaagaagtatacaacatcattttagagtcgcagtctgca
ccgcaagtagaaatagttgtttcaaggccaattggagacacgccaagaattccagacaag
tcacatccacctcttgaatctactggttcaagttctatagatgagtcccacaaggtggac
cgtccttccatctccgtcatgtccccgaccagtccgggaatgttgagagacctgcctcag
gaccttccaggccagcttttagtgaaactgtggtatgacaaagtgggccatcagcttatc
gtcaacgtgttacaagccatagacctgccttctcgacccgacggccgaccgcgcaaccct
tacgtcaaaatgtacttccttcctgatcggagcgacaagagcaagaggaggacgaagacg
gtgaagaagaactcggagccacggtggaaccagacattcctttactcacacgtccaccgc
agggatttcagagagcgcatgctggagatcaccgtgtgggaccagccgagggcgcaggaa
gaggagagcgagttcctcggagagatcctgatcgagctcgaaacggctctgttggacgat
cagcctcactggtacaagctgcagacccatgatgcgtcctctctccctctaccccaaccc
tcgccatacctccctcgcagacacgtccacaccgacagccccagcaaaaagttacagaca
gcagagaggaactccagagagagggagaagtacagcacactgacggttcccgagaggcag
gcagccattcagcatcgctctcgctctgtctccccacacagagaagaccagtgtagagga
cgttcacgccacacacatgtccccatgcagaggagtctagatgaaattcgccagaaacga
catcattcccagtcacccactcattactacaataacccacaacaggaacaccgatccgga
gactcagactacgactactcagaggacagtgaggtcctggagatgcacagatcaatccgt
ggcgggagcgctgagtgcctgcacacaaacagtgaccttcagccatcattggacagagtg
cgaagtgccagtacgacctgtctgaggcctgagagcagtttccgctcccctgatagagaa
aggctgtcaggcagtttgaacaggcctgtgcgtgcaaaaactaacaagaaatccattgac
aatgacaggatccagcccacctccatcctgcggggcagcaggtggaggagagatggtcca
atccggccgtttgagcactccggcctggacagagcccacggtggacgtaattctcctaca
gagtcttccttatcagtgcgcagaggacgacagctcccacaactccctgcaaaaagcagc
agtatagagcaagctctggcagtagaagaacgagctcggcagttgagtcagataagggtt
ccatcttatcggccaggttcgtctgccagctcaggccatgaacaggacatggctctgaag
aacaagagagatctgtacaagaggagctgtgataacatgtcagcgaggtcttcagacagc
gacatgagcgacgtgtcagccgtgtcgcgagccagcagtgcctctcgtctaagcagcgcc
agctacatgtctgtccaatcagagaggccacacggacggatcagtcggcaggttcgggcc
tcggctggtcgcaacatgttaaagagcacgagcgtgagcggtgacatcaacacgcccgag
cgaacggacggcagccagtcggacacggcgctcggaacagtgggcagcagcagcaagaag
cgtcgctccagcctcaatgctcgctttgtagccatcgtgggaaacagacgcagccgcagc
acatcgcagatcagccagacagaggcatccaataaaaagtcaaagggaggtgggacgata
cagaggagtcaggagacgggcatggcggtcgagctgcagcgcaacatgagccgacagccg
agccgagagtccaacaacggcagtatggccagctacaactccgagggaagtccgatcttc
ccagccgtgcgggtggagactcagtttagtgacttcctggatggactgggtcctgcccag
ctcgtgggccgacaaactttagccactcctgctatcggagacatccagattggcatggtg
aacaagaagggaaagctagaggtggaggtgatccgagctcgtggcctcatccaaaaacca
ggatctaaatctctcccggctccttatgtaaaggtgtacctgctggacaacggagcatac
gtggccaagaagaaaacgaaaatcgcacggaagacgctggacccgctgtaccagcaaacc
ctgcagtttgaggagagtccacaggggaaagtgttacaggtcatcgtgtggggagactac
ggacgaatggaccacaaatccttcatgggagtagcacaaatcttattggaggagctggac
ctggccagcaacgtgattggctggtacaaactatttccgccctcctccttagtagacccc
acgctggcatcgctgaccaggcgagcttcccagtcgtctctggacagttcttcaggaccc
ggtggggttcgttcctag
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