Tachysurus vachellii: 132839911
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Entry
132839911 CDS
T09596
Symbol
vps41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
tvc
Tachysurus vachellii
Pathway
tvc04140
Autophagy - animal
tvc04148
Efferocytosis
tvc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132839911 (vps41)
04148 Efferocytosis
132839911 (vps41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132839911 (vps41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132839911 (vps41)
Membrane trafficking [BR:
tvc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
132839911 (vps41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_HPS5
zf_RING_Vps8_fungal
TPR_7
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
zf_RING_Vps8
Vps39_1
WD40_Prp19
TPR_PEP5_VPS11
zf-C3H2C3
Helicase_PWI
zf-RING_5
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
132839911
NCBI-ProteinID:
XP_060717107
LinkDB
All DBs
Position
25:complement(7749101..7788702)
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AA seq
854 aa
AA seq
DB search
MSEVEEQGKKPGEESTDDSEEEDSEEEPKLKYERLSNGVTEILQKDAASCLTVHDKFLAL
GTHFGKVFLLDIQGNITQKYEISSVKINQISLDESGEHVGICSEDGKVQVFGLYTRAGFH
ENFDCPIKVVALHPQFSKSSNKQFVTGGNKLLLYERNWLKSWKTSVLHEGEGTISNVKWR
ANLIAWANSVGVKIYDISSKQRITNVLRDNSNLRPDMYPCSLCWKDNTTLIIGWGSSVKI
CIVKERDPSEMRDLPSRYVEIVSAFETEFFISGLAPLADQLVTLYFVKENSEHMEEEFRS
RPRLDIIQSLPESCEEISSDALTVRNFQENECRDYRLEHSEGESLFYIISPKDIVVAKER
DQDDHIDWLLDKKKYEEALMAAEISFKNIKRHDVQKIGMAYINHLVEKGDYDGAARKCQK
VLGKNMDLWENEVFRFKTIGQLKAISQYLPRGDLRLRPAIYEMILHEFLKTDYEGFATLI
REWPGELYNNMTIVQAVTDHLRKDSTNSILLTTLAELYTYDQRYDRALEIYLRLRHKDVY
QLIHKHNLFSAIEDKIVLLMDFDKEKAVDMLLDNEDKISVDRVVEELKDRPELLHVYLHK
LFKRDHHRGQRYHEKQISLYAEYDRSNLLPFLRDSTHCPLEKALEICQQRHFVEETVFLL
SRMGNCRRALQMIMEELGNVDKAIDFAKEQDDAELWEDLISYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMKIPNLRDSLVKILHDYNLQILLREGCKKILVADSLSLLQKMHRTQM
RGVRVDEENICEACHVTILPADTAQAFSVVVFHCRHMFHKECLPSPGTIPGGQYCNICSA
KRRGPGSGILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagtggaggagcagggaaagaaacctggtgaggagtccacagatgactcggag
gaagaagacagtgaggaggaacctaaattgaaatatgagcgcttgtccaatggggtgacg
gagattctgcagaaggatgcagccagctgcttgacagtacatgataagtttctggcgctg
gggacacattttggaaaggtcttcttactcgatatccaaggaaacataacccagaagtat
gaaattagttcagtgaagataaatcagatcagtctggatgagagcggagagcatgtgggg
atctgctcagaggatggaaaggtacaggtgtttggcctctataccagagcaggcttccat
gagaactttgactgtcccattaaagtggtggctttacatcctcagttcagcaagtcaagc
aacaagcaatttgtaactggaggaaacaagttgctgctgtatgagagaaactggctgaaa
agctggaagacgtccgttctgcatgagggagagggaacaatttcaaacgttaaatggagg
gcaaatctcatcgcctgggctaacagtgtgggggtgaagatctacgacatcagcagtaag
caacgaatcaccaatgtgttacgtgacaactccaacttgaggcctgacatgtatccctgt
agcctttgctggaaagataacaccaccctcattatcggctggggatcttcagtcaagatt
tgtattgtcaaggaacgtgacccttcagaaatgagagatttacctagtcgctatgtcgag
attgtgtcagcatttgagaccgagttcttcattagcggactcgcccctttggctgatcag
cttgtcacgctttactttgttaaggagaattctgagcatatggaggaggagttcaggtct
cgtccacgattagatatcatccagtcgctgcctgagagctgtgaggagatctcgtcagat
gctctcactgtccgcaactttcaggagaatgaatgccgggactacagactggagcactca
gaaggagagtctctgttctacataattagccctaaagacattgtggtggctaaagaacgg
gaccaggatgatcacatcgactggctgcttgacaagaagaaatatgaggaggcactaatg
gcagcagagatcagcttcaagaatatcaaaagacacgatgtacagaaaattggaatggcc
tacataaatcacctggtggagaagggggactatgatggtgcagcaagaaagtgtcagaag
gtgctaggaaagaatatggatttgtgggagaacgaagtgtttaggtttaaaactattgga
caactgaaggccatcagtcagtacttacccagaggagatctgcgcctcagacctgccatt
tatgagatgatcctgcatgaattcctcaagaccgactatgaaggttttgccacactcatc
cgggagtggccaggagaactctacaacaacatgactatagttcaggctgtgacagaccac
ctaagaaaggactccaccaacagcatcctgctcaccacattagctgaattatacacgtat
gaccagcgctatgaccgagctctggagatctacctgaggctgagacacaaagatgtctac
cagcttattcacaaacacaacctcttctctgcgattgaggacaaaattgttctgctcatg
gactttgacaaggagaaagctgtcgacatgctgctggataatgaagataaaatatcggtg
gaccgagtggttgaagagctgaaggacagacctgagctgttgcatgtgtacctgcataag
ctgtttaagcgagaccaccacaggggccagagatatcacgagaagcagatcagtctgtat
gcggagtatgatcgatccaaccttctccccttcctcagagacagcactcattgcccactg
gagaaggccttggagatctgccagcagagacactttgtggaggaaacagtctttctgctc
agtcgcatggggaactgcaggcgggcgttgcaaatgatcatggaagagctgggaaatgtt
gataaggccatcgattttgctaaagagcaggatgatgccgaactgtgggaggatctcatc
tcttactccatagataaaccaccctttatcacaggcctcctgaacaacataggaacccac
gtggaccccattctcctaatccatcgcattaaagaaggcatgaagatcccaaatctcaga
gattcacttgtcaaaatcctgcatgattacaatctacagattttattgcgagagggctgt
aagaagatcctggtagcagattcactctcactgctacaaaagatgcacagaacccagatg
agaggcgtccgagtggacgaggagaacatctgtgaagcatgtcatgtcacaattctgcca
gcagacacggctcaagccttcagtgtcgtggtcttccactgcaggcacatgttccataaa
gagtgtctcccttcaccaggaacaattccaggtggacagtactgcaacatctgcagtgcc
aagcgaagaggtccaggcagcggcattctagagatgaagaaatag
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