Tachysurus vachellii: 132839926
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Entry
132839926 CDS
T09596
Name
(RefSeq) LOW QUALITY PROTEIN: polycomb complex protein BMI-1-A-like
KO
K11459
polycomb group RING finger protein 4
Organism
tvc
Tachysurus vachellii
Pathway
tvc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
132839926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132839926
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
132839926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
COMM_HN
COMM_domain
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
RING_ZNF598
Prok-RING_4
MOM1
zf-Nse
Exonuc_VII_S
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
132839926
NCBI-ProteinID:
XP_060717123
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Position
25:6678567..6690321
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AA seq
595 aa
AA seq
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MELSDSVVKGLQSLSDPASLDLKSFTIFTEAAFHSLLSFPTESVFDYPELKNNDQALLKQ
CHAAATTFILEAVKQNADRSTVCSCLEDLRYDGERVEAFYALYQVITSSKGCCLLSNLXT
NMFVTLLFILHLEKXKANLEKLLSSIDRCPPHITDVSWRLDYCIKNSHVHKVNQPSYLIS
FNTENGGNNGASSKLNFSCTLEQLQDLVGKMKDAAKSVERATQLYENASTRSSNSQAALK
QRSHVTARGGRTASHFGGRCQFPPSHQSSVPSMTMHRTTRIKITELNPHLMCVLCGGYFI
DATTIIECLHSFCKMCIVRYLENSKYCPICDVQVHKTKPLLNIRSDKTLQDIVYKLVPGL
FKNEMKRRRDFYAEHPSVDAANGSNEDRGEVADEDKRIITDDEIISLSIEFFDTKAKQQG
SEGEKQTKDEVNNKRYLQCPAAMTVMHLRKFLRSKMDIPCTFQIEVMYEDEPLKDYYTLM
DIAYIYTWRRNGPLPLKYRVRPNCKKMKITHTQDGLSSANRSESDSASDQANSPAGAPST
SSPLPSPSTPVQSTHPHFPHISNPVNGSSMGSPNRQFTFNKMRKPSLNGSSTSSG
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtcagactcggtcgtaaaggggcttcaatccctatccgatccagcttccttg
gacttaaaatccttcaccatcttcaccgaagcggccttccacagtctgctgtcgtttccg
accgaaagcgtgttcgattacccagaactaaaaaacaatgatcaggctctcctgaaacaa
tgtcatgctgcagcaacaacctttatactggaagcagtaaaacagaatgcagacaggtca
actgtatgctcgtgccttgaagacctcagatatgatggcgagagagtggaggcgttttat
gcgctctatcaggtgatcacatcctccaaagggtgttgtcttctgagcaatttgtaaaca
aacatgttcgtgacattactttttattttacatttagaaaaanncaaagctaatttggaa
aagctgttgtcaagcattgatagatgtcctcctcacataacagatgtttcttggcgctta
gattactgtataaagaacagccatgtgcataaggtcaatcagccatcctatctgatttct
ttcaacactgagaatggcgggaataacggagcctcttcgaaactaaattttagctgcaca
ttggaacaacttcaggatttagtgggaaagatgaaggatgcagcgaagagtgtggagaga
gccacccagctctacgagaacgcatcgacccgtagctctaattcccaggccgcccttaag
caaaggagtcacgtgaccgcgcggggcggtcgaaccgcaagccattttgggggacggtgt
cagtttccaccgagccatcagagcagcgttccttccatgacgatgcatcgcacaacaagg
atcaagatcacagagctaaatccacatttgatgtgtgtattatgtggtggatatttcatc
gacgcaaccacaatcatagaatgcttgcattcattttgtaaaatgtgcattgtgcgctac
ctggagaacagtaaatactgtcccatatgtgatgtccaggttcacaaaacaaagcctctt
ctcaatattaggtctgacaaaactctgcaggacattgtgtataagttggtcccaggtctt
ttcaaaaatgaaatgaagcgaagaagagatttctatgctgaacacccttcagtggatgct
gcaaatggatctaatgaggatcgtggtgaagttgctgatgaggataagagaatcatcaca
gatgatgagattatcagtctgtcaatcgagttctttgacaccaaggctaaacagcaaggt
agtgagggagagaaacagactaaggatgaggtaaacaacaagaggtacttgcagtgtcct
gctgccatgactgtaatgcatttgaggaaatttctgagaagtaagatggacataccatgc
acctttcagattgaagtcatgtatgaggatgaacccctaaaggactactacacattaatg
gacattgcttacatttacacatggagaaggaatgggccgctacccttgaaatatcgagta
cgtcctaactgcaaaaaaatgaagattactcacacgcaggatggcttaagcagtgccaac
cgctcagaaagtgactctgcaagtgaccaggccaacagcccagctggagctccgtctaca
tcctcaccactaccaagtccaagcacacctgttcagtccactcatcctcattttcctcat
atttccaacccagtcaatggctcctcaatgggaagccccaatcggcaatttacgttcaac
aaaatgcgaaaaccttctttaaatggatcttctacttcttcagggtga
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