Tachysurus vachellii: 132840218
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Entry
132840218 CDS
T09596
Symbol
col28a1b
Name
(RefSeq) collagen, type XXVIII, alpha 1b
KO
K23619
collagen type XXVIII alpha
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tvc01002
]
132840218 (col28a1b)
Peptidases and inhibitors [BR:
tvc01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
132840218 (col28a1b)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
132840218
NCBI-ProteinID:
XP_060717698
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Position
25:complement(15491780..15510131)
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AA seq
1131 aa
AA seq
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MKAKLWRSTLLCFSLLFLSRDVRSQNRRNQTNLSTTDGKVLVCALELAFLLDSSESAMSY
GFAKEKEFALSFGARVMKMQVDGWHLMPRLAALQYSSAVSIVQSFSDWHSLDRFQDIVSS
MPYIGQGTYTSYAIGNATDLFVRETNDKSVRVILLMTDGADHPRSPDILSATTEAKGHNI
KLFTISLSSQGSKKSPKLQAMASSPAHQFVHNLNDLGIEEKLLQELKKITSSECPRVKAC
VCEKGDRGPQGNPGEKGDPGTEGLPGQKGVKGDIGPTGPLGPDGPEGRPGYKGDKGDRGE
CGAPGLKGNKGAEGPPGPRGARGEQGPQGPPGDEGPEGQEGPKGDRGLPGATGPRGDIGV
GFPGPKGDKGNQGRPGPVGPIGKGEPGQPGPPGFPGLQGAPGFPGQGLVGPKGDQGYNGS
TGARGPPGFAPKGEKGNPGRHGPPGPIGPIGVGIQGEKGSQGPIGPPGPRGLPGISLAGE
KGDRGFPGEHGQQGQKGIGEPGAKGEPGLQGVPGEPGAPGEDGARGAKGETSLPGPRGPE
GPPGKGLPGEKGEPGERGARGPPGFIGPLGPVGRKGEPGGLGLPGDTGPPGKGVPGSMGD
PGPPGLPGPAGENGIGFPGPKGEKGIPGPLGPQGLKGDGYPGPPGPPGDKGLPGEPGPAG
IGFPGPKGDQGSTGPPGPVGPSGIGHVGQKGSIGQTGPPGPNGPPGEGIQGPKGEPGFQG
LVGPRGAPGEGLPGQKGDRGFSGERGRKGDKGGQGEPGETGPYGRPGQKGEPGLTREEVV
KLIQSICGCGVTCRFSPLELVFVIDSSESVGPDNFEIIKDFVNGLIDRVSVGPNITHVGI
VLYSHMTAVISDLHRPLSRDEVKSAVRRMSYMGEGTYTGSAIHEANQLFRSARPGVRKVA
LVITDGQVDQRDVVKLKDAVRDAHTTNVETFVIGVVNQSDPFYESFNKELESIASDPDEE
HIYLISDFRTLTVIESKLLVKLCEGSDGLFRQTPSPDLLPVTPGLNIQTFKPLITQKGAS
AGTLDSTRAPSFNRENGNRLYDPSDIVRPVQPQTTTTEPSLILIQDEFIKGDACLQPLNP
GPCRAYTVKWYYEPKANSCAQFWFGGCHGNRNRFDTESDCKKSCVINNLPR
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctaagctgtggaggtcgacactgctgtgcttttcattgttgttcctttcacgc
gatgtccgaagtcaaaaccgaagaaaccaaacgaacctgagcacaacagatggaaaggtt
ctggtgtgtgcgctggagttggccttcctcctggacagctcagagagcgccatgtcgtac
ggctttgcgaaggagaaggagtttgcgctctcgtttggtgctcgggtaatgaagatgcag
gtcgacggctggcacctaatgccccgcctcgccgctctccagtacagcagcgccgtgtcc
atcgtgcagagcttctctgactggcacagcctggaccgcttccaggacattgtatcctcc
atgccctacatcgggcagggcacgtacacatcctacgccatcgggaacgccacggacctc
tttgtacgtgaaaccaacgacaagagcgtaagggtgatactgctgatgactgatggcgcc
gaccatccacggagtcctgacatcctgtctgcgaccacagaggccaaaggtcacaacatc
aagctcttcaccatcagcttgtcatcacagggcagcaaaaaaagccccaagctacaagcc
atggctagcagtccagcacaccagtttgtgcacaacctcaatgatctaggcatcgaagag
aaactgcttcaggagcttaaaaaaataaccagcagtgaatgtccacgagtgaaagcgtgt
gtgtgtgagaaaggagacagaggacctcagggaaaccctggggaaaaaggagatccaggg
actgaaggactgccaggacaaaaaggtgtaaagggcgacatcggaccaacaggacccctg
ggaccagacgggcctgagggacgacctgggtacaaaggtgataagggtgacagaggagaa
tgtggagctcctggattaaaaggaaataagggtgctgaaggacctccaggaccgagaggt
gcccgaggagagcagggtccccaagggccaccaggggatgaaggacctgaaggacaagaa
ggccccaaaggggatcgtggacttcctggtgcgaccggacctcgaggggatataggtgtt
ggatttcccgggcctaagggggacaagggaaaccagggaagaccgggtcctgtaggtccg
atcggaaaaggagaaccaggccaacctggaccaccaggatttccagggcttcaaggggcc
cctggcttccctggacaggggctagtaggaccaaagggggatcaaggatataacggttca
actggagcacgtggaccaccaggttttgccccgaagggtgaaaaggggaatcctgggcgc
catgggcctcctggtcccataggacctattggggtgggaatacaaggagaaaaggggtcc
cagggtccaataggtccacctggtcccagagggctcccagggataagcctcgctggtgaa
aagggagatcgtggcttcccaggagaacatggacaacaaggacagaaaggaattggagag
ccaggagccaagggtgagcctggccttcaaggtgttccaggggagccaggtgctccaggt
gaagacggagcaagaggagcaaagggtgaaaccagtcttcctggacctagaggaccagag
ggacctcctggtaaaggtctacctggagaaaagggcgagccaggagagagaggagcaaga
ggaccaccaggattcataggaccattgggtccagtagggagaaagggagaaccaggaggt
ttggggcttcctggggatactggacctccaggaaaaggagtacctggaagtatgggggat
cctgggccacctggacttccaggacctgctggagaaaacggaataggtttcccagggcca
aagggtgaaaaagggattccaggacctttaggaccacaagggctgaagggagatggctat
cctggaccacctggtcctccaggcgacaagggactacctggagagcccggtccagcaggg
ataggctttcctggaccaaagggtgatcaaggttctacaggacctccagggccagtaggg
ccatcaggaattggacatgtaggccaaaagggttctataggtcagaccggcccacccggc
ccaaatgggcccccaggagagggaatccaaggcccaaagggtgagcctggatttcaggga
ttggtgggaccaagaggagccccaggagagggtttacctgggcaaaagggggaccgtggg
ttttcaggagaacgaggacgtaaaggggataaaggaggacaaggggaaccaggagaaaca
gggccatacggaagaccaggccaaaaaggagaacccggtcttactagagaagaagttgtc
aaattaattcaatccatttgtggttgtggggtgacttgcagattcagccccttggagctg
gttttcgtgatcgacagctcggagagtgtcggtcccgacaacttcgaaatcattaaagac
tttgtgaatggactgattgaccgcgtttccgtcgggcccaatatcacacatgttggcatt
gtgctgtacagccacatgactgctgtgatcagtgatcttcatcgacccttgagccgtgat
gaggtgaaatctgccgtacgccgaatgtcctacatgggggagggaacctacacgggaagc
gccatccatgaggccaatcagctgttccgctcggcccgccctggagttcggaaagtggct
ctggtgattacagatggccaggtggaccaacgggatgtggttaagctgaaggatgcggtc
agagatgcgcacaccaccaacgtcgagacgttcgtcatcggtgtggtgaatcagagtgat
ccgttttatgaaagcttcaataaagagctggagtccatcgcgtctgacccagatgaggag
cacatttatctgattagtgacttcaggacactcactgtaatagagagcaagcttctggtt
aaactctgcgagggcagtgacggcttgtttaggcaaacgcccagtcctgatctcctcccg
gtaacgcccggactcaacatccagacctttaaacctttaattacacagaaaggagcatct
gcaggaaccttagacagcaccagagctccatcctttaacagagagaatgggaaccgcctg
tatgatccgtcggacatcgtgagaccagtccaaccacagaccaccaccactgagccaagc
ctaatactgattcaggatgaatttattaaaggtgacgcctgcctgcagccgctcaacccc
gggccgtgccgcgcgtacacagtgaaatggtattacgaacccaaggccaactcctgtgct
cagttttggttcggaggttgccacggcaaccgtaatcggttcgacacggagagcgactgc
aagaaatcctgcgtcataaacaatctgcctcgctga
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