Tachysurus vachellii: 132840249
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Entry
132840249 CDS
T09596
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1-like
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
132840249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132840249
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132840249
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132840249
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
Baculo_IE-1
zf-C3HC4_2
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
132840249
NCBI-ProteinID:
XP_060717749
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All DBs
Position
25:16501958..16503391
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AA seq
398 aa
AA seq
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MTPTRRAEEILDEIHTDLLECKVCFETFSSEPRTRRPRNLPCGHVICLGCVCSLSHAVSR
HLECPFCRKQCGQGDTYECQVLVDLQEMIGLYFPQKKNKDCEKDLGSGVMRLDSAYGGWG
PLINPTGVVVFGASQDVLVAHGGHQRVTGFGSRGQFLCSFGRYGHNSFEICHPLDLAVTP
DGHVVVTDAGDRSVKVFSSTGNPVTTIPEFQLPWGVDVDISGTILVTDAETGTLWQIIMD
FRHGVVSVKKAMVKDLKTPRAVACCRASGRIAVVEHLQIRESSGDDATLTRLKVFNSDFI
LLKQMDTLSFHPLKLSISAITFNRHGGLIVADVNQGLVWSLGDVQKAPELIPLVREGLVR
PVGLVATDEDTLIVLDAGDHTVKTFTSNFEDLYSDNKL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgactcccaccagaagagctgaggagatcctggatgagatccacactgatctgctcgag
tgtaaagtgtgtttcgaaacattttcatccgaacccagaactcgaaggccacgcaacctc
ccctgtggtcatgtgatctgtctggggtgcgtctgcagcctgtctcatgccgtgtctcgc
catctcgagtgccctttctgcaggaagcaatgcggtcaaggtgacacctatgaatgccag
gttctcgtcgaccttcaggaaatgatcggtttgtattttcctcaaaaaaaaaacaaagac
tgtgagaaagatctggggtcaggggtcatgcgtctagacagtgcctacggaggatggggt
ccgctcatcaacccaaccggtgtagtcgtgtttggagcatcacaggatgttctggtggcg
catggaggacaccagagagtgaccgggttcgggagtcgtggtcagttcttgtgcagtttt
gggcgctacggacacaacagcttcgaaatctgccatcctttagatcttgctgttacaccg
gacggccatgttgttgtcacagatgcaggagatcgctcagtcaaggtgttttcatcgaca
ggaaatccagtgaccaccatcccagagtttcagcttccttggggtgttgacgtggacatc
tcaggtaccatcttagtgacggacgctgaaaccggaacactttggcagatcatcatggac
ttcagacatggcgtggtttcggtaaagaaggcgatggtgaaagatctgaagactccacga
gccgttgcttgctgtagagcgtccggacgcatcgcggtggtggaacatctccagattcga
gaaagttcaggggacgatgctacactgacacggttgaaggtcttcaacagtgatttcatc
ctcctcaagcaaatggacactctcagttttcaccctctgaagctgagcatctcggccata
accttcaatagacatggaggtttaatcgtagctgatgtgaaccagggactcgtgtggagt
ctaggagatgtccagaaagctccagagttaattccactggtgagagagggactggtgcgt
ccggtgggattagtggcgaccgacgaggacacgctgatcgtcctggatgccggagatcac
accgtgaagacgttcacgagtaactttgaggacttgtacagcgataacaaattatga
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