KEGG   Tachysurus vachellii: 132840380
Entry
132840380         CDS       T09596                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
tvc  Tachysurus vachellii
Pathway
tvc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    132840380 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvc03400]
    132840380 (xrcc1)
DNA repair and recombination proteins [BR:tvc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     132840380 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 132840380
NCBI-ProteinID: XP_060717947
LinkDB
Position
25:complement(17419521..17428289)
AA seq 605 aa
MPEIKLKHVVSCSSEDSTHKADNLLSSETYRKWKSARPGEKQVSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGHSTSIKDQDFEVLLVTSSFMSPSESRGNLNLNRVRFFSPQQLVKSTS
QEKWDRVKIVCTQPYNKSIAYGVAFIKFHSPPDNDSPASTPPNLTKLGQFRLKDESQSSG
SNLQPGSLFLKRESKDSTGVKFSPKSNTLSYATAALQAEPSTSSSAPTSSPQTAVSVKRK
FEFSKERQDAPPPPAKKHTRPPKPITPNAEHTHTPTSTKTASISQKTPVQKSSVKPRPLA
SEPVPFCRIMEGVVFVLSGFQNPFRAELRDKALSMGARYLPDWTPDSTHLICAFSNTPKY
SQVKAAGGLIVRKEWVIDCHKRKKKISYKRYLIDGAESSSEDEMDDITVEEQTHDEGGKK
KSPEKRHKTSTKSVTEERQDVSIDEREEEDDDDGSGMDTEDELRRVEKRRGEKAGQENRR
SGGGQETEDDPYGGSTDENTDAEEEEDKPIPELPDFLTGKRFYIYGKFPENQRRLLQRYI
VAYNGVVEDYMNEKVQFVITSQGWDDTFEDALMENENLSFVKPTWIFAINERQKMLPYQP
YTVVP
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgcctgagattaaactgaaacatgtggtgtcctgcagcagtgaggacagtacacataaa
gcagataaccttttgagttcagagacgtacaggaagtggaaatctgctcgtcctggagag
aagcaggtttcagttatcctccagtttgagaaggaggagcaggtccacagtattgacatt
gggaacgaaggatcagcctttattgaagttcttgttggacactcaacctctattaaagac
caggattttgaggtgttgttggtgacatcatcgttcatgtctccctctgagagtcgaggg
aatttgaatctgaaccgcgtgcgatttttcagccctcagcagctagtaaagagcacaagt
caggagaaatgggacagagtgaagatcgtctgtacgcaaccctacaacaagagcattgcc
tatggagtggcgtttataaagtttcattctccaccggataatgacagtcctgcttctaca
ccacctaatttgactaaactgggtcagttccggttgaaggatgagtctcagtcttctggg
tcaaacctgcaaccagggagtctgttcctgaagcgagagagtaaagacagtacaggagtg
aaattttctcctaaaagcaatacactgagttatgcaacagcagcactacaggcagaacca
tcaacttcaagctccgcccccaccagctcaccacagactgctgtatcagtgaagagaaag
tttgagttcagtaaagagagacaggatgccccgcctccccctgccaagaaacacacacgt
ccacctaaacccattacaccgaatgctgaacacacgcacacacccaccagcacaaaaaca
gcatctatttcccagaagaccccagtgcagaagtcctctgtgaagccccgccccctggcc
tcagagccagtccccttctgccgaatcatggagggcgtagtgtttgtgctgagtggattt
cagaacccgttccgtgcagaactcagagacaaggctctgtccatgggggcacggtaccta
ccggactggaccccagactccactcacctcatttgtgccttttctaacacccctaagtac
agtcaggtgaaggcagcaggggggctgatagttcggaaggagtgggtgatcgactgtcac
aagaggaaaaagaaaatctcttacaaacggtatctgattgatggagcagagtcaagctct
gaggatgagatggatgacatcactgttgaggagcagacacacgacgaggggggaaaaaaa
aagagtcctgaaaagagacacaagacctccacaaaatctgtgacagaggagaggcaagat
gtgtcaatagatgagcgagaagaggaagatgatgatgatggatcaggcatggacactgag
gatgagctgagaagagtggagaagaggagaggagagaaggcaggacaggagaacagacga
agtggaggaggacaggagacagaagacgacccatatggcggctcaacagatgagaacaca
gatgcagaagaagaggaagacaaacccatacctgaactaccagactttctgacaggaaag
cggttttatatttatgggaaatttccagagaaccagagacgtttgctgcagcgttacatc
gttgcctataatggtgttgtggaggactacatgaatgagaaggtccagtttgtgatcacc
agtcagggatgggacgacaccttcgaggacgctttgatggagaatgagaatctgagtttt
gtgaaacccacatggatttttgctattaatgaaaggcagaagatgttaccctatcaaccc
tacactgtagtcccctaa

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