Tachysurus vachellii: 132840425
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Entry
132840425 CDS
T09596
Symbol
rad54b
Name
(RefSeq) DNA repair and recombination protein RAD54B
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132840425 (rad54b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tvc03400
]
132840425 (rad54b)
DNA repair and recombination proteins [BR:
tvc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
132840425 (rad54b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_22
SWI2_SNF2
AAA_34
Motif
Other DBs
NCBI-GeneID:
132840425
NCBI-ProteinID:
XP_060718047
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All DBs
Position
25:complement(10236896..10256630)
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AA seq
906 aa
AA seq
DB search
MRRSAAPSQLLHGNAAKKPRFVPPPALVHTGAVSTSGPTSAPDNVLNKVQRSLSERTGDT
PAVAGASSVGRALARVLSAVAHEERKENSLECLSCPLESVQLPDSPQQSSHTTIMPTARY
YSVMWCKASSRKHKRWEGDAVLVASGRSVVLKDMEGKDIGRGSGYKASELESLCEGQTLM
VGGKQIEIMGVISDDDYAKGRCFQDAIVEFPLEICSKAPVRHQRPQLAKPFARPALKDAT
LRVSEPEGPVCKPRHDPNCPGALVMPRPSANHQWLCNKNGLTLVDVVVDPHLTNHLRPHQ
REGVVFLYECIMGIRLAGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGGRPVLKRALV
VCPGSLVKNWAIEFNKWLGRERISVYTVDQDNRVEDFISCPRSPVMVISYEMLLRSVETL
KKLEIGLVICDEGHRLKNSNIKTASALTALACERRVILTGTPVQNDLHEFYSIIEFVNPG
ILGTSAAYRKIYEEPILKSRQPTCTEEERCIGEERAAELARLTSAFTLRRTQEIINCFLP
GRLEWTVFCRPTELQVQLYNELLSSRPVKACFAATSVHTFTHSPHLACINALKKLCNHPG
LLYNTIKEKKTDQLYDSISIDLFPETYTTGGFCTGDSGKLLVLTDLLASIKHVNCTDKIV
LVSNYTQTLDLLQDLCVHLGYTWCRLDGQTPVAQRQRIVDSFNRPHSSHFLFLLSSKAGG
VGLNLVGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGTIEEKIYQRQVS
KQGLSGAVVDLGKKGEHINFSAEDLRDLFTFDSNTDCLTHDLLDCKCSGDGRMPGVIEEV
APGRACQLGRRGKGANVPQRVSMSELMQWKHYSGTIASYGDVYLDHAHSHITYAFQSTTS
KTQDIT
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaggtccgcggcaccaagtcagctgctccacggcaatgcagcaaagaagccacga
tttgtacctcctcctgcattggtacacacaggtgcagtgtccacctcaggaccaacatca
gcacctgacaatgtccttaacaaggtgcagaggagcttgtctgagaggactggagacact
ccagctgttgccggagcatcttcagtgggtagggctttagccagggttctgagtgccgtt
gctcatgaagagaggaaagaaaatagcctggagtgtctcagctgccccctggaatcagtg
cagctcccagattctccccaacagtcatcacacaccactatcatgccaaccgcccggtac
tacagtgtaatgtggtgcaaggcatcctccaggaagcataagcgctgggaaggtgacgcc
gtgctcgtggcttcagggcgcagtgttgttctcaaagacatggaggggaaagatattgga
cgagggtcaggttacaaagcatctgaactggagagtctgtgcgagggccaaactttaatg
gtaggagggaagcagattgagatcatgggggtcatctcggatgatgactatgctaaggga
cgatgttttcaagatgccattgtggagtttcctttagagatttgttctaaagcaccagtg
agacatcagagacctcagctggccaaaccctttgccagaccagcactgaaggatgcaact
ttgagagtgtctgaacctgaggggcctgtctgcaagccaagacatgatcctaattgtcca
ggagctcttgtgatgcctcggccttcagccaatcaccagtggctttgtaataaaaatgga
ctcacgttagtggatgtagttgtggaccctcacctaacaaaccatctgcgaccacatcag
agggagggtgtggtcttcctatatgaatgcatcatgggaattaggttggctggccgttgt
ggagccattttagcagatgagatgggtttggggaagacactgcaatgtgtgtgtgtcttg
tggactttactaaggcaggggccttatggtgggcggcctgtgctgaagagagcgttggtg
gtttgccccggtagtctggtgaaaaactgggctattgaattcaataaatggcttggcaga
gagaggatcagcgtttacactgttgaccaggacaaccgtgtggaggactttatatcctgt
ccccggtctcctgtaatggtgattagttatgagatgttactgcgctctgtagaaacatta
aagaagctggagattggtctggtcatctgtgatgagggccatcggcttaaaaacagcaat
atcaaaacagccagtgctctcactgccctggcctgcgaacgtcgggtaatacttacaggt
actcctgttcagaatgacctccatgagttctactccattattgagtttgtaaatccaggc
attttgggaacttcagcggcttacagaaagatttatgaagaaccgatcctcaaatcccgc
cagcccacctgcactgaggaggaaaggtgcataggtgaagagcgagcagcagaacttgct
cggctgaccagcgcatttacgctgcgcaggactcaagagatcatcaactgtttcttacct
gggcgactggaatggacggtgttctgtaggcccacagagctgcaggtgcagctgtacaac
gagctgctctctagccgacctgtcaaggcgtgtttcgctgccaccagcgtgcacacgttt
acacacagccctcaccttgcctgcattaatgctttgaagaaactatgcaaccaccctggg
cttctttacaacacaataaaggagaaaaagactgatcagttgtatgacagcatttctata
gacctctttcctgagacctataccactggaggtttttgcacaggagactctgggaaattg
ctggtgctcacagaccttttggcttctataaaacatgtcaactgcacagacaagattgtg
ttagtgtctaattatacacagacacttgatctgctgcaagacctctgtgttcaccttggt
tacacctggtgtcgacttgatggacagacacctgttgcccagcgacaacgaatcgtagac
tcctttaaccgtccacactcctcccacttcctatttcttctcagttcaaaggctggagga
gtggggcttaatcttgttggtgcctcccatctggttttgtatgatatcgactggaaccca
gctaatgacatacaggccatggcccgagtatggagagatgggcagaagaaaacagttcac
atctacagatttctaacaacaggtaccatagaagaaaagatctaccagagacaggtgagt
aagcagggactttctggagctgtggtggacctggggaaaaagggtgagcacatcaacttc
tcagccgaggacctgcgtgaccttttcacctttgactctaataccgattgcctcactcat
gacctgctggactgcaagtgctcaggggatggaagaatgccaggtgtgattgaggaagtg
gctccaggaagggcatgccagttgggtcgccgtggcaaaggtgccaatgttccacagcgg
gtcagcatgtctgagcttatgcagtggaagcattactctggaaccattgcatcatatggt
gatgtttacttggaccatgcacacagtcatatcacatatgccttccagagcactacttcc
aaaacccaagatataacataa
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