Tachysurus vachellii: 132840446
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Entry
132840446 CDS
T09596
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
tvc03015
mRNA surveillance pathway
tvc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132840446 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
132840446 (rbm8a)
03015 mRNA surveillance pathway
132840446 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132840446 (rbm8a)
03041 Spliceosome [BR:
tvc03041
]
132840446 (rbm8a)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
132840446 (rbm8a)
Spliceosome [BR:
tvc03041
]
Complex C
Other components
EJC/TREX
132840446 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
132840446
NCBI-ProteinID:
XP_060718087
LinkDB
All DBs
Position
25:complement(16071632..16093889)
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AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQELMGQPISVDWGFVRGPPKSKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtactggatcttcacgaagcgggaggcgaggactttcctatggatgaagat
ggcgacgaaagcattcacaagctaaaagaaaaagccaagaagaggaagggacgtggattt
ggatctgaggaaggagcgaggtccagggttagagaagattatgatacagttgaacaggat
ggcgatgagcctggaccacaaagatctgtcgagggctggatcctgtttgtaaccggcgtt
cacgaagaggcaaccgaggaagacattcacgacaaattcgcagagtttggcgagatcaag
aatctgcacctcaatttggacagaaggacaggttacctcaagggctacgctttggtagag
tatgaaacgtataaagaagcgcaggctgccatggagggactgaacggccaggagctcatg
gggcagcccatcagtgtggactggggctttgtacgagggcctcccaagagcaagagaagg
ggaggaagaaggcggagcagaagtccagacagaagacggcgctga
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