Tachysurus vachellii: 132840580
Help
Entry
132840580 CDS
T09596
Symbol
spata13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
tvc
Tachysurus vachellii
Pathway
tvc04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
132840580 (spata13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132840580 (spata13)
Membrane trafficking [BR:
tvc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
132840580 (spata13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_2
SH3_1
SH3_9
PH
DUF3104
Motif
Other DBs
NCBI-GeneID:
132840580
NCBI-ProteinID:
XP_060718324
LinkDB
All DBs
Position
25:2379611..2404795
Genome browser
AA seq
1255 aa
AA seq
DB search
MRKTLHSDGASAQGRMSLVYPSIANGASLDHHTEATARLSCSSFEPKKRENSGAPVRPVH
PEACCEKRGLNGTNDYQWSNPSIVDAQDTSHTTKNVRIFSFQRKCGAAGPEKTPLRGPGL
HFMGSFKKLRSSVLQGIQNRGGVTLDNQEKVEESNGFFVTKRHFGSSQTNGKEMPTVSNG
VSPTVPRTCVLDVEDDDDEDGCGLQRNSHFSRSIRRAYGAGRISLMDNARKQSESPSAQD
PASRPRPCSTVESIEPNDILDTDVNALSRLSKSADNLHVYKSPFKRKVPSSQTQNLEDPS
TKNFQRTSSASSVVMQDCVSSRCRGVTGVRGKMLKLVGSLTDLSANRKPNSDPTSAAALS
ALTQLHDDYSRRTPCVPASERQRRPPPSNTGTKVQADVHNHTPFIPADALGHITVNSSDL
QVPQCSTATAQVPSSFVQIPVSSTLCSDISITHSTENCGTVEEEQNLKIDVIQDEQCTSP
GHEQKLDSIKVNLECIWKTLERESEHLETPSGAPSFTDLVKENDEKYGDSVFVSPPVTPT
CASASPLVTAPTSPASSCDTPIVSVPRRRTNRNRPRPISDYGQLICRKYAVPKEEVELQG
DAQEERNATDAHAELHNQETSCENGHMDSRRRRPISVIGGVDLFASPDEKEDADLPTPVV
RPPVPSHGVPPYRAVSARLRPCVFSQSTPTGLDRVGWRKPRRVLSDGNSGPDDCVSEEDG
SFDELTDGTPYLQPEVDLSTLNQYISSGHVVYAEALWDHVTMGEQELAFKAGDVIRVLDA
QEKDWWWGLVGERQAWFPSSFVRVRVNQEDSPGDGVENSPEQQEALSKEPRSQTSEHREQ
MRANVVQEIMNTERVYIKHLRDICEGYIRQCRKHPGMFTDTQLKTIFSNIEEIYKFQRKF
LKDLEKNYDKENPHLSEIGSCFLQQGEGFSIYSEYCNTHPAACTELQRLMKQGRYKHFFE
ACRLLQQMIDISIAGFLLTPVQKICKYPLQLGELLKYTPKGHSDYAGVCKAHEAMKNVAS
LINERKRRLESIDTIAHWQEAIVHWEGEDVLSRSSELIHSGELTRVVRAGKTQQRSCFLF
DHQLVFCKKDVLWRDLLHYRGRLNTDILVPLDLPDGRHPDLGTLRNAVALRNHDTLEVLC
VLSCRKAQDKQLWLEAFSRERRRVKEDQEMGMEISETQRKQAIQNARKSKQGKMKNIKYA
GHPVSHHHQPLHPVHQRHITVPTSIPQQQVFSLAEPKRKPAHLWYTFTRNALFRK
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagactcttcactcagatggagcctcagctcaaggcaggatgtctttggtttac
ccatcaatcgcaaacggagcttctcttgatcatcacactgaggctacagcgaggcttagc
tgcagctcctttgaaccgaagaagcgggagaattccggtgctccggtgaggccagtccac
cctgaggcctgctgtgagaaacgtgggctcaatggcacaaacgattatcaatggtccaac
cctagtattgttgatgcacaagatacatcacacaccaccaaaaacgtgcgcatcttttcc
ttccagcgaaagtgtggtgccgcaggccctgagaagacaccgctacgaggcccgggtctc
catttcatgggttcctttaaaaagttgcgctcctctgttctccagggcatccagaacaga
ggaggtgtgacattagacaatcaggagaaagttgaggagagcaatggtttctttgtaact
aaaagacattttggaagcagtcaaaccaatgggaaggagatgccaacggttagcaatggg
gtatctccaactgtaccaagaacatgtgtcttagatgtggaggatgatgacgatgaagat
ggctgtggcttacagagaaactcgcacttctcgcggagtatacgtagagcatatggagca
ggacgcatctccctgatggacaatgctagaaagcagtcagaaagtccaagcgctcaagat
cctgcttctcgccctcggccctgcagcaccgtggaatccattgagcccaatgacatttta
gacactgatgtgaacgccttgagtagacttagcaaaagtgctgacaacttgcacgtatac
aaaagcccgttcaaacgcaaagtaccctcaagtcagacccagaacctggaagatccaagc
accaaaaatttccagagaacatctagtgcttcgtctgtagttatgcaggattgtgtatca
agtcgatgtaggggagttacaggagtgcggggaaagatgctcaaactcgtcggcagctta
acagatctgtctgccaaccgcaagccgaacagcgaccccaccagcgcagctgccttgtcg
gctctcacccaactccatgatgactattcccgcaggactccctgtgttcctgctagcgag
cgtcaacgcaggcctccaccgtccaataccggtactaaagttcaggctgatgttcataac
cacaccccgtttatacctgcagacgccttaggacacattaccgttaattcctcggatctt
caggttcctcagtgttccacagccacagctcaggtccccagttcttttgtccagattcca
gtgagctcaactttgtgttcagatatttccatcacacacagcactgaaaattgcgggact
gtagaagaagagcaaaatttgaaaattgacgttattcaggatgaacagtgcaccagtcca
ggacatgagcagaaactggacagtattaaagttaacttagagtgcatctggaagactctg
gagagagagagtgaacatttagagacgccatctggagccccgtctttcacagacctcgtg
aaggaaaacgatgaaaaatacggcgactctgtgtttgttagtcctcctgtcacacccacc
tgtgcctcagcgtcgcccctggtgacagcaccaacctcgccagcctcctcctgcgacacg
cccatcgtttccgtgcccaggaggaggacgaacagaaacagacctcgaccgatctcagac
tacggacagctcatctgcaggaagtatgctgtccccaaggaggaagtggaactccagggt
gatgctcaggaggaacgtaacgctactgacgcacacgccgagctgcacaatcaagagacc
agctgtgagaatggacacatggacagtaggaggaggagaccgatctctgtgattggagga
gtggatctgtttgcatctccggatgagaaggaagacgctgatttgcctactcctgttgtt
cgaccccctgtaccctctcacggcgtgcctccgtaccgcgccgtgtctgcccgcctgcgc
ccctgcgtcttctcccagagcacaccgacaggcctggaccgagtgggctggcgcaaacca
cgccgagtcctcagtgatgggaactcaggccccgacgactgtgtgagtgaggaggatggc
agttttgatgagcttacagatggaacaccgtatctgcagccagaggtcgatctgtccact
ttaaaccagtatatctcgtcaggacatgtcgtttacgccgaggctctttgggaccacgtg
acgatgggtgagcaggagctggccttcaaagccggggacgtcatccgggtactggacgcc
caggagaaagactggtggtgggggctggtgggcgagcggcaggcctggttcccctccagc
tttgtgagagtgcgtgtgaatcaggaggactcgcccggtgacggtgtggagaactctccg
gaacaacaggaggctctttctaaagaaccacgcagccagacgtctgaacaccgagagcag
atgagggctaacgtggtccaggagatcatgaacaccgagcgcgtctacatcaaacacctc
cgagacatctgtgagggatatattcgtcagtgcaggaaacacccaggcatgttcacagac
acccagctcaagaccatcttcagcaacatcgaagagatctacaaattccaacgaaagttc
ctgaaggatctagaaaaaaattatgacaaagaaaaccctcatctgagtgagattgggtca
tgcttccttcaacagggtgaaggtttctccatatactcggagtattgtaacacacacccg
gcggcgtgcacagagctgcagcgactgatgaagcagggacgctataaacacttcttcgag
gcctgtcgcctcctgcagcagatgattgacatctccatcgccggcttcctgctcacgcct
gtgcagaagatctgcaaatacccacttcagctgggcgagctgctcaagtacacaccaaaa
ggccacagtgactacgccggagtgtgtaaagcccatgaggcgatgaagaacgtggccagt
ctgatcaacgagaggaagaggaggctggagagcatcgacaccatcgctcactggcaggag
gccatcgttcactgggagggtgaagatgtgctatcccggagctctgagcttattcattcg
ggtgagctgacgcgtgtggttcgtgccgggaagacgcagcaacgcagctgcttcctgttc
gaccaccagctggtcttctgtaaaaaggacgtcctgtggcgggaccttctgcactaccgt
ggacgccttaacacagacatcttggtaccgctggatctgcctgacgggcgtcatccggac
ctgggaacgctgcgaaacgccgtcgccctgcgtaaccacgacacgctggaggtgttgtgt
gtgctgagctgtaggaaagcccaggacaagcagctgtggctggaggctttcagtcgagaa
cgcagacgtgtgaaagaggaccaggagatgggaatggagattagtgaaacccaaaggaag
caagcgattcaaaatgccagaaaatccaagcaaggcaaaatgaaaaatataaaatacgca
ggtcacccagtgtctcatcaccaccaacccttacaccctgtccaccagcgccacatcact
gtacccaccagtatcccccagcagcaggtcttttctttagcagaacccaagaggaaacct
gcacatctttggtacacgttcacgcgcaacgctcttttcaggaaatga
DBGET
integrated database retrieval system
