Tachysurus vachellii: 132840648
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Entry
132840648 CDS
T09596
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
132840648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvc04121
]
132840648
Enzymes [BR:
tvc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132840648
Ubiquitin system [BR:
tvc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132840648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-RING_Vps41
zf-ANAPC11
pAdhesive_17
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
132840648
NCBI-ProteinID:
XP_060718448
LinkDB
All DBs
Position
26:complement(10729914..10824985)
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AA seq
799 aa
AA seq
DB search
MRLAAQRLAGLWPWLFTATLQVALGHAGLEVAATRALIKVTLLNPKAIPFTLEGVFAGSS
SGFAEGKLMQSHPLSLCNTSEDERQESFISIVKLESPESKVPQCLPLLEKARLALNRGAQ
AVIFDITDDLKAAIELNSGILKKPVVMVKAADAEELMGLVNKNEEANVEINIMMETPKWT
PYEVGILSTVVLVVLAIIMIFAFRSRCRSNRTWDSVHQQTMRAISRLETRTYSSQGCSGG
SHHPRGGRGSNSSSGSGPMCAICLEEFLDGQDLRVISCAHEFHKECVDPWLLQHRTCPLC
MHNIMAGVETSSRPPQRVLGHPPPELSQAFLHTHPQQYTGPHSFSQHPIPFSLRPNYPRT
LSGPYPQLGAYGGSPPYHTRLLSTSCSYHLAPDGHRARPRHSCRNVGHHYTSQRRPCHHC
HANRTRHQNHHQNQRHGASQGRQDEGSCSGASYGTERSGYFPDGPGSDSSSGPCHGSSSD
SVLNCTDVSLQGVYGSCSTFRSSLSSEYDPFVYHSAGSEGPTGSTRPRSLDSGVNQTSGG
LGFEEPQQQQAVFSHVHYHRHRHHYYDEGEHSQGPGRGSDEEQGTSGVAAGNSPMSKDST
LCQGAHIACHCPKTDTIDRCGPPGGVEDREAAAPPSPTSSLPGTSVLISAPACCHPGHQH
CQKNTGCSLEASAPPMPAVHFHQRVDLQDDCSIHIHYGQSPAGYCCPSPLGATSTLLPVP
VILDSSGLAEWPCCRGARRGWQKQVQQAHSEPQLMGTGTLLDTPLCRGHHSAGHELPTEI
CLYCQSVRNNQGSEEESGV
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaggctcgccgcacagcgcctggccgggctctggccgtggctcttcacggccaccctg
caggtggcgctgggccatgcgggcctggaggtggcagcgacccgcgccctcatcaaggtc
acgctgctcaaccccaaagccattcccttcaccctggaaggggtgtttgctggaagcagc
agcggattcgctgagggtaaactcatgcagtctcacccgctgtctctgtgtaacaccagt
gaggatgagcgacaagaaagcttcatcagcattgttaagctggagagtccagagagcaaa
gtgccccagtgcctgccacttctggagaaagctcggctagctctaaacaggggagctcag
gctgtcatttttgacatcactgatgatcttaaagctgctattgagttgaattctggcatc
ttgaagaagccagtggtgatggtgaaggcagcagacgctgaggagctgatgggactggtc
aataagaacgaggaggccaacgtcgagattaacatcatgatggagacaccaaaatggact
ccttatgaagtgggaatcctctcaactgttgtcttggttgtgctcgcaatcattatgatc
tttgcctttcgctctcgctgcaggtccaacagaacttgggactctgtgcaccagcagacc
atgcgggccataagcaggctggaaacacgtacctacagctctcagggctgctcaggagga
tcccatcatccacgtggtggccgaggatcaaacagcagctccggctcgggccctatgtgt
gccatctgcctcgaggaattcctggatggacaggacctgagggtcatctcatgtgcgcat
gagttccataaggagtgtgtggacccatggttgcttcagcaccggacctgtccgctctgc
atgcacaacataatggcaggtgtagagacaagtagtcgtccgcctcagcgagtcctagga
catccgcccccagagctcagccaggcattccttcacacccacccacaacaatacacaggt
cctcactctttctcccagcaccccattcccttctccctccgacccaattacccccgcaca
ctgtcagggccctatccacagctgggcgcctacggtggctcgccaccctaccacactcgc
ttattgagcaccagctgcagctatcatcttgccccggatgggcaccgtgcccgacctcgc
cacagctgccgtaatgttgggcaccactacacatcacagcgtcgtccatgccaccactgc
catgctaaccggacgcgacatcaaaaccatcatcaaaaccagcgccacggagcttctcag
gggcgccaggatgagggcagctgctcaggagccagctatggcacagaacgcagtggctac
ttccctgatggaccaggcagtgactcaagctcgggcccatgccacggctcatccagtgac
tcggtgcttaactgcactgatgtaagtctgcaaggtgtttacggcagctgctccaccttt
cgtagttcactcagcagtgagtacgacccatttgtataccacagtgccggttctgaaggt
ccgacaggtagtaccaggccccgatctctagattcaggagtgaatcagactagtggaggg
cttggatttgaagaaccacagcagcaacaggctgtattcagccatgtgcattaccataga
cacagacaccactattacgatgagggtgagcacagtcaaggaccaggaagaggttctgat
gaggagcaaggaacttcaggagtagcagcaggcaattcacccatgagtaaggactcaact
ctatgtcagggggcacatattgcctgccattgccccaaaacagatactatagacaggtgt
ggacctcctggtggggtggaggatcgggaagcagcagctcctccatcccctacttcctcc
ttacctggcacctcagtgctaatctctgcaccagcctgctgccacccagggcaccagcac
tgccaaaaaaacacaggctgcagtctagaagcttctgccccacctatgccagctgtgcac
ttccatcagagagtggatctacaggacgattgcagcatccacatccactatgggcaaagt
cctgcaggttactgctgcccctctcccctgggtgcaacatctacactgctgcctgtacct
gtaatcctggactcgagtgggctggcagaatggccctgctgcagaggggcacgaaggggg
tggcagaagcaggtgcaacaggctcactctgagccacagctaatggggacaggcactctt
ttggacacacctctgtgcagagggcatcacagtgccgggcatgagttgcccacagaaatt
tgtctctactgccaaagtgtacgcaataatcagggatcagaggaagagtctggtgtttga
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