Tachysurus vachellii: 132840760
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Entry
132840760 CDS
T09596
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
132840760 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tvc04040
]
132840760 (trpv1)
Ion channels [BR:
tvc04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
132840760 (trpv1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ank_2
Ank
Ank_3
Ank_5
Ank_4
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
132840760
NCBI-ProteinID:
XP_060718692
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Position
26:complement(11356162..11369370)
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AA seq
784 aa
AA seq
DB search
MDIVETFSLETDDRTSEERAKAKAARKDRQAYGKDKVPMDTDLPEDHIDFSRQVRYDPKF
LDKIQGIKAESSQHDRFDIKRLFDAVSSGDVTRLESLEDYLRKTNKKLTSSEYRPNGKTA
LMKALLNLRNGDNATVEHLLGIAERMGHLDKLVNASYTDGYYEGQTALHIAIERRNKRFA
ELLIQKGADVHARACGTFFQPLSETCFYFGEFPLSLAACTNQKDIVDLLMAKADVKLKDT
LGNTVLHALVMVADNSPVNTDFVISMYDYILTKDAAKNPEQERLEDIENNQGLTSIKLAA
KLGKIGLFEHILHREFHQEECRHLSRKFTEWAYGPVYASLYDLKSIDTYEPNSVLEIVVY
GSDIPNRLEMIQIEPLNKLLDDKWNRFAHRIFLFKFIVYVIYLFIFTIVSYHREEGEPKP
KARMPSPKKKKGNDPDDNLMFAGQIIMAIGSIYFFLTVLMDIKRKRPSLKTLLVDGYSEL
LFLFQAVLFMICMGLYVGEMREYLAFLVLSLALCWVNLLYYSRGTRHMGIYSVMIQRMIL
SDILRFLFVYMVFLFGFSAAVVTLLNNDSDETESQDQNQASTLKRNHSGGRSLYNDASNN
CKKPSFKTIAFTTLELFKFTIGMGDLEFTEQYEYRHIFYVLLITYIVLTYILLLNMLIAL
MSKTVEKMSKESTNIWKLQRAITILDLERYTCCLKTRLRSGVKKNLGKKEEDWRWCLRVE
EVNWKKWNHNLGIISEDPGECNTVMLPGPQREPSRRGFLREISRRTTNTRLSGQERQPLA
TTPV
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggatattgtggaaaccttttctttggagaccgatgataggacgagtgaggagagggct
aaggccaaggcagcaaggaaggatcgtcaagcatatggaaaggacaaagtgccaatggac
actgacctcccagaggatcatattgatttttcacgccaagtccgatacgacccgaagttt
ttggacaaaatacaagggataaaagccgaatcaagtcagcatgataggtttgacattaag
aggctttttgatgccgtgtccagtggtgatgtcactaggctggagagcctggaggactac
ctgcgtaaaacaaacaagaagctgacaagcagtgaatatcggcccaacggcaagacagcc
ctgatgaaagctctgctaaacttgagaaatggagataacgcaacagtggagcacttgctg
ggtatcgcagagagaatgggacatctggataagttagtgaatgcatcatatacagatggc
tattatgaaggacagacagctcttcatatcgccattgagaggagaaacaagcgctttgct
gagctgctcattcagaaaggggcagatgtccatgcaagggcctgtgggacgttcttccag
ccacttagtgaaacatgcttctactttggggagtttccgctttctctagcagcatgtact
aatcagaaagacatagtggatctgctgatggcaaaagcagacgtgaagcttaaagacact
ctggggaacacggttctccatgctcttgttatggtggctgataacagccctgtaaataca
gacttcgttatttccatgtacgactacattcttaccaaagatgctgctaagaaccccgaa
caggagaggctcgaggacattgagaacaatcagggacttacatccatcaagctggctgcg
aagttaggaaagattgggctgtttgaacacatacttcatcgtgagttccaccaagaagag
tgcaggcatctgtcccgaaagttcacagagtgggcatatggcccagtgtatgcttctcta
tatgacctgaagtctatagacacctatgagccaaactctgtcctggagattgttgtttat
ggttcagatatacctaatcgtcttgagatgatccaaattgagccgcttaataaactcctg
gatgacaaatggaacagatttgctcaccggatattcctgttcaagtttattgtttatgtc
atttatctcttcatcttcacaattgtttcttatcaccgtgaagaaggagagcctaaacct
aaagccaggatgcctagtccaaaaaaaaaaaagggaaacgatcctgacgacaacttaatg
ttcgccggacagatcatcatggctatcggatcaatctacttcttcctcactgtgctgatg
gacataaagcgaaagcgtccaagtctaaaaacactgctggtagatggctattctgagctg
ctttttttatttcaggctgtgctctttatgatttgtatggggctgtatgtcggtgagatg
agggagtatcttgccttcctggtgctcagtttggctctgtgctgggtgaatctgctctac
tactccagaggaactagacacatgggcatctacagtgttatgattcaacggatgatcctt
agtgacattttacgcttcctcttcgtctacatggtcttcctctttggattttcagcagct
gtggtcacgctcctcaataatgactcggatgaaactgaatcacaagatcagaatcaagca
agcacactcaagagaaaccactcggggggacggtcattgtataacgatgctagtaacaac
tgcaaaaaaccctcctttaaaaccatcgccttcaccacgctggagctgtttaaattcact
ataggcatgggcgacctggagtttacagagcagtacgagtatagacatatattttatgtg
ctgctcataacctacattgtgcttacgtacattctgctgctgaacatgttgattgctctg
atgagcaagactgtggaaaagatgtccaaggaaagcaccaatatctggaaactacagcgt
gccattaccatcctagatctggagagatatacatgttgtctgaagacgaggttgcgctca
ggagtgaagaagaacctgggcaaaaaagaggaggactggcggtggtgtctcagagtggaa
gaagtcaactggaaaaaatggaaccacaacctgggtatcataagtgaggatcctggagaa
tgcaatacagtaatgttaccgggacctcaaagagaacccagccggcgtgggttcctacgt
gaaatcagccgacggacaaccaacacacgtttgtcagggcaggagagacaaccactggca
accaccccggtgtaa
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