KEGG   Tachysurus vachellii: 132841042
Entry
132841042         CDS       T09596                                 
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
tvc  Tachysurus vachellii
Pathway
tvc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    132841042 (wdr36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tvc03009]
    132841042 (wdr36)
Ribosome biogenesis [BR:tvc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    132841042 (wdr36)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_VPS8 Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_Vps41 eIF2A Beta-prop_HPS5 WD40_RFWD3 Utp12 Beta-prop_LRRK2 Zn_Ribbon_Topo Nucleoporin_N SGL COS Beta-prop_EDC4L
Other DBs
NCBI-GeneID: 132841042
NCBI-ProteinID: XP_060719189
LinkDB
Position
26:complement(13244661..13263763)
AA seq 893 aa
MSVVGKKGSVIFCGFRALGLYSNHLPHVVRFHKKHREFYVVTPVGQCFHTYNVKKLGIVA
VSNALPEDIAYLAADRLLVYAAHGKVISAFAKNTEVVHTYEGHQADVHLLLPFGDHLISV
DKDNAVIIWDVESEDIYLQISFNKSTFEVGAVMHPSTYLNKILFGSSQGSLQLWNVKSNK
LLFTFPGWGSAVTVLQQTPAVDVVGVGLASGQIVIHNIKFNETLMKFQQDWGPITALSFR
TDGNAVMAAGSPVGHIGLWDLEDKKLIGQMRDAHTTAIAGLTFLHGEPLLLTNGADNAIR
VWIFDVAGGEGRLLRFRMGHSAPPTMIKHYDQSGQHILSASQDGSLQSFSTVHERFNKSL
GHGSFTKKKAKKKGATFDTAKLPPITTFASETARQGDWDGIVACHQGFVVSTTWNYRKGS
MGAHRLEPKRFNKNRALSVHATAVDVTSCGNFVVIALSSGHIDVYNMQSGLHRGQYGQDR
AHSGPVRGVSVDALNQLTVSAGADGLLKVWKFKSKELLNTHSLQASPASTLLHRDSGMLA
VALDDFTVSIFDMEMKRIVRHFSGQRGQINDMTFSPDGRWLITASMDCTIRTWDLPSGSL
VDCFLVDTAAVSVSFSPTGNVLASAHVDTLGIYLWSNTTLCSLVSLRPLPADYEPTVVML
PGTCPSKDEEEDVLEPESSEMDEYVSPAQLDEQLVTLSLLPDSRWKNLLHLDIIKKRNKP
KEPPKVPKASPFFIPTVPGLVPQFVLPDTSSEAQSKVFNIGVLAQKSNFYLQLEEALDSN
LYEAAVRHLKELGPSAIDMELRSLAPDMGGNVSVMQSFLRMISSMLRQKQDFDLAQAYLA
LFLKIHLRLIAEQQVLMQETENVLELLDRTWTSIQTLLNQNMCLLSYIKSALL
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgtccgtggtcggaaaaaaagggagcgtgatattctgtggatttagagcactcgggctt
tattccaatcatcttccacacgtggttcgtttccacaagaaacaccgggagttttatgtg
gtgacacccgttggccagtgtttccacacctacaatgtgaagaaacttgggattgtggct
gtcagtaatgctcttcctgaagacatcgcctatctcgctgctgaccgattgctcgtctac
gccgcgcatggaaaagtcatttcagcttttgcaaagaacacagaggttgttcacacttac
gaaggccaccaagccgacgtccatctactgcttccgtttggagaccatttaatatccgtg
gacaaggacaatgccgtcattatctgggacgtggagtcagaagatatatacttgcagatt
tcatttaacaaatccacgtttgaagtcggggctgttatgcacccgagcacctacctgaat
aaaatcctgttcggaagcagtcaagggagccttcagttatggaacgtcaaatcgaacaaa
cttttgttcacttttcctggctggggctcggcagtgactgttctacagcagactccggca
gtggacgtggtcggcgtgggcttggcttcaggacagatcgtcatccacaacatcaaattt
aacgaaactctgatgaagtttcagcaagattggggtccgatcacggccttatcctttcga
acagatgggaatgcagtgatggctgcaggaagccctgttggacacataggattatgggat
ttggaagacaagaagctgattggtcagatgagagacgcacacaccacggcgatagctggt
ctcaccttcctgcacggcgaacctctgctccttactaacggagctgataacgccattcgg
gtttggatttttgacgtagcgggaggtgaaggacgtctgttgagatttcggatgggtcac
agcgccccgcccaccatgatcaaacactacgaccagagcgggcaacacatcctcagcgcc
agccaagacggctcactgcagtctttttctactgttcatgaaaggtttaacaagagtctg
ggacatgggtcttttaccaagaagaaagccaaaaagaagggggcgacgtttgacacggca
aaacttccacccatcaccacttttgcatcagaaactgcacgtcagggtgactgggatggc
attgtggcttgccaccagggttttgtagtgagcacaacttggaattatcggaaaggctct
atgggggctcacaggctggaaccgaagcgtttcaacaagaaccgcgctctcagcgttcat
gctacggctgtagatgtcacttcctgtgggaactttgttgtgatcgctctgtcttcagga
cacatagacgtctataacatgcaatcgggtctccatagaggacagtatggacaagaccga
gcgcattcggggccagttcgaggcgtctcggtggacgctctgaatcagctgacggtcagc
gccggtgccgacggtctgctgaaggtgtggaagttcaaatcgaaagaactcttaaacaca
cacagcctgcaagcgtcaccagcttccacactcttacacagagacagcgggatgctagcg
gttgctcttgatgacttcactgtcagtatcttcgacatggagatgaagcggattgtacgt
cacttctctggccagcgtgggcagattaatgatatgactttcagcccggacggacgatgg
ttgataacggcctccatggactgtaccatcaggacctgggacctaccatctggcagtttg
gtcgactgtttcctggtagacacggcagccgtgagtgtcagcttctctcccacggggaat
gtccttgcctccgcccatgtagacactctgggtatttacctatggtccaataccacattg
tgtagtttggtgtcattgcgccctctacctgcagactatgaacctacagtggtcatgctg
cccggcacctgtccgagtaaagatgaagaagaggatgttttggaacccgagagctcggaa
atggacgagtatgtgtcccctgcgcagctggatgaacagctggtcactctttctttgttg
cctgattcccgatggaagaatcttctccatttggacattattaagaaaagaaacaagccg
aaagaaccccctaaagtgcccaaagcatccccttttttcatcccaactgttcctggactc
gtccctcagttcgtccttcctgatacatcatcggaagcacagtccaaggtgttcaacatt
ggcgttctggcccaaaagtctaatttctacctccagctagaagaagcgctagacagcaat
ctctatgaggcagcagtgaggcacttgaaggagttgggaccttctgctattgacatggag
ctacgaagcttggcaccggatatgggtggaaatgttagtgttatgcagagcttcctcagg
atgatcagcagcatgctgaggcagaagcaagacttcgatctggcacaggcctatctagcc
ctcttcctgaagattcacctgaggttgattgcagagcaacaggtcctcatgcaggagacg
gagaatgttctcgaactgttagataggacgtggacctccatacagactctcctcaaccag
aacatgtgtcttctgtcctacatcaagagtgcgctgttgtag

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