Tachysurus vachellii: 132841115
Help
Entry
132841115 CDS
T09596
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132841115 (arhgef28a)
Membrane trafficking [BR:
tvc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
132841115 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
C1_1
SOS1_NGEF_PH
C1_2
PH_13
PHD
Motif
Other DBs
NCBI-GeneID:
132841115
NCBI-ProteinID:
XP_060719293
LinkDB
All DBs
Position
26:complement(6591218..6669422)
Genome browser
AA seq
1792 aa
AA seq
DB search
MELNRDEIPVYGQVEVCAVLQDPQSVQEKAEYYVLLKGSQIHHVTTAQRKEKSHLLSFII
PGHNVAEKVSVQLYCWDESSSCNQPTLMSEELSLEYKWDTIQEVADLLISDPDNFTTSTH
VDIQRKFCSGDSIQPEQNSSDMNEQHGMSTLDEESLRLSQTLNKMKKESGSHNPEETPEC
CEPDPGEGFKLEPCGEVDVKITQAVSNMFSLLEWSNQKSQESQAFHHIETPLHIAVRLGL
YHLTLFYLHQSGGQEMATLPNEEGHTPAELAQSRGNAAIISALSNLLACREERPVWMSQI
WADESHLLRSYPLTSSFVLTVKHTVYFDPQRSIQLYREKHGYVESHVQEAVLTEVEEKSR
PNQTDDSSDEGLSSRTNAEDCVLLNSVFEEQLVLSLDEDEENPTTYNSEKSFCSPPGSSS
PLQIQSTDITAARITAMLNRTGKNDEQHRKCNIAAVTNDSSNTDTLPVVKVDWTKEQRPF
SRAFSPPLTPFSHTSSAGLVLDRFLRSSCHNDHDTRNVGSLPESYELSPNLVALEMDSEE
EDDDMLMKKPLPQISAENKDNGDKQDGFNPSSDLGCTRSHSASSDCNHGYQKECADQGLR
LRSYSYSSPKLSLLPPRAGRDAPRPPPDLNHDGVLTSNTSGSRSLLQALSLSKSLSLLNP
VKQRALSLTEQTQEKRELRFRRRTQSADDESSVELTDSLQHLTLSEFLKEIEEEGWDKYI
IPSKTEPEKYKVSRTFSFIKSRMYSTRSKKGKAKEKEVKEKQSSGHQFAAGPVLGTSVCE
VCDKPVTGKETLHCTNCAVCVHKGCKDSAAQCLKKVQDKYTVSVMKARAATLPQNFVLRE
SITSSQMSPSSSLPVMTPRDRRDASTLPCNLSRSVPLVPEWLAESPEGDSDPSSWRSHGQ
SEELQQNVESSTSTDSSLVEDTVDAPLQNSFGTDALYLEAESWSLAVEAQFCQKQEKRTI
KRQDVIYELMHTELHHLQTLTIMAEVFRRGLREEVGLDAEAIARIFPCLDELLVLHRDFF
SMMTERRNNSTQPDNEKNYLIHHVGDILLQQFSQENAENMKLVYGEFCSRHNEAVSFFKE
LQQQNKRFQLFIKQQSSNSLVKRREIPECILLVTQRITKYPVLLERILQYTEEGTQEHAD
ISAALSLVREMISAVDVRVSEREQSQRLSDVLGRMESKSLARLKSGAAFRKHDMTNGRTL
LHHGPLLWKTATGRLKDVLALLLTDLLVFLQEKDQKYIFAAVDQKCPVISLQKLIVREVA
NEERGMFLISASSSGPEMYEVHAASKDERNTWMRLIREAVVICHEKEEDTASESEEERRA
AEAKNQKIQKLQESLYSHDQLICSSLEEKLHIYAELSAMVGHRDISPEPKLLVCPNTEEL
PNAAVLLNAALKEAESLKEALSFHCGSTSCPGPLLVSEEQNNSDATPQLEAPDPASSPPP
VPAEEEPQAVDTVRSEEEESRGEDSLELQLRNQSSATDNHNMHLKICQSVQSLTQLLYSL
QAVVTIQDSRYEVRRLLLLLLSSSTQRISQGSLQEQERQREAERQRQELARATRERQQWT
RECQAQHQRFEEREMELAQREQQCHEEAQRLQRQREELEEQQQEYQQSLERLREGQRSVE
REKEKVKMQQRMTERWKHERQHNTSIKLEGHQGSGDETKSFHHGHHSGLDEDGSVYVNEA
VFLAPSMNNRHLHHYQHQYQHNTHLHPGYVDSPSAQNSLNSLLALSNHTHPTISMQDEPW
TEDVGPASHTTRTAGAVGPGIYQGDALLVTQAFVSMETENQDPEGEEKIVYL
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaacagagatgagatccctgtttatggtcaggtggaagtgtgtgcagtactg
caggatcctcaatctgttcaggaaaaagctgaatactatgtgttattaaaaggctcacag
atccaccatgtcaccacagctcagaggaaggaaaagagccatttactgagcttcatcata
cctggtcacaatgtggcagaaaaggtctctgtacagttgtactgctgggatgagagcagc
agctgcaatcagccaaccctgatgtcagaggaactctcactggagtacaaatgggacact
atacaggaagtggctgatctcctcatatctgaccctgataactttacaaccagcacacat
gtagacatccagagaaagttctgttcaggagacagtatccagccggagcagaacagttca
gatatgaatgaacagcatggcatgtcaacactagatgaagaaagtttaagacttagccaa
acactcaataaaatgaaaaaagaatcagggagtcacaatccagaggaaactcctgaatgt
tgtgaacctgatcctggtgaaggattcaaactggagccatgcggtgaggttgatgtgaaa
atcacacaagcagtttctaacatgttctctctgctggagtggagcaaccaaaagtcacag
gaatcacaagctttccaccacattgagacccctctgcacatagctgtgcgtttaggtctg
tatcacctcacactcttctaccttcatcagtctggaggtcaggaaatggcaacactgccc
aatgaggaaggacacactcctgctgaactggcccagagcagaggcaatgcagcaattata
agtgctttatccaaccttttagcttgcagagaggagagaccagtgtggatgtcccaaatc
tgggctgatgaatcacacctcctcagatcgtacccattaaccagttccttcgtcctgacg
gtcaaacacacagtttattttgatccccagaggagcatccagctctatagggaaaaacac
ggatatgtagaaagccacgtgcaggaggctgttctcactgaggtggaagagaaaagcaga
ccaaaccagacagatgactccagtgatgaaggtttgagcagccggacaaacgcagaggat
tgtgttctgctgaacagtgtttttgaagaacagcttgttctttctctggatgaagacgaa
gagaatcccaccacatataattcagaaaagtcattttgctctcctccaggttccagctct
ccactccagattcagtctacggacatcactgctgccagaatcacagccatgctcaaccgc
accggaaagaatgatgagcagcacaggaagtgcaacattgccgcagtgactaatgacagc
tctaacactgacacacttcctgtcgtcaaagtggattggacgaaagagcagcgaccgttc
tctcgcgctttctctccgcccctcactcctttctcccacacttcttcagcaggactggtg
ttggatcggtttcttcgcagcagttgccacaacgatcacgacactcgcaacgtgggttca
cttccagaatcctatgaacttagcccaaacctcgtggccttggaaatggacagtgaagag
gaagacgacgacatgctcatgaagaagcccctccctcagatctcagctgaaaataaagac
aacggagataaacaggacggcttcaatccgtcctccgacctcggctgcacccgctctcac
tccgcttcctctgactgtaaccatggctaccagaaggaatgcgcagatcagggattacgt
ctccgttcgtattcttattcctcacccaaactcagcctgctgcccccccgcgccggccga
gatgccccgcgtcctcctcctgacctcaaccacgatggcgtcctcaccagcaacaccagc
ggcagcagatctctcctacaggctctgtctctgtctaaatctctgtctcttctcaatcct
gttaagcagcgtgcgctgagcttaaccgagcagacgcaagagaaaagggagttaaggttc
cgtagacgcactcagtcagccgatgacgagtccagcgtcgagctgactgattcgctacaa
cacctcacgctctccgaattcctcaaagaaatcgaagaagaaggctgggataaatacatt
attccttccaagactgagcctgagaaatacaaagtcagccgcaccttcagtttcattaaa
agccgaatgtacagcacgcgcagcaagaagggaaaagccaaggaaaaggaagtgaaagaa
aaacagagcagcggacaccaatttgcagcaggtcccgttctggggacctcggtttgtgaa
gtgtgtgacaaacctgtcactgggaaggaaacactgcactgcaccaattgtgctgtttgt
gtccataagggttgtaaagattctgcagcacagtgcctcaagaaagtgcaggacaaatac
acagtttctgtgatgaaggctcgagcagcgacactccctcaaaactttgtattgcgtgaa
agcatcacgtcttctcagatgtccccctcgtcctccctccctgtgatgactccacgagac
agaagagatgcctcaactctgccatgcaatctatccaggagtgttcctctagtcccagaa
tggcttgcagagagcccagagggagacagtgatccctcctcctggagatctcatggtcag
tcagaggagctccagcagaacgtggaatcttccacctctacagactcatccttggttgaa
gacacagtggacgctcctctgcagaacagcttcgggacagacgctctgtatttggaggca
gagtcgtggagtttagcggtggaggcccagttctgtcagaagcaggaaaaacgcacgatc
aagagacaggacgtcatctacgagctcatgcatacggagctacaccacctgcaaacgctg
accatcatggcggaggtgtttaggcgaggactgcgggaggaggtgggcttggacgcggag
gctatcgctcggattttcccgtgcttggacgagctcctcgtcctgcaccgtgacttcttt
tccatgatgacggagcgcaggaataactccacacagcctgataatgagaagaactacctc
attcaccatgtgggtgatatcctcctccaacagttttctcaggagaatgccgaaaacatg
aagctggtctacggagagttctgcagccgccacaacgaagccgtcagcttcttcaaggag
ctccagcagcaaaacaaaagatttcagctctttattaaacaacagagcagcaactcgctg
gtaaagaggcgagagatcccagaatgcattctgttagtgacgcagcgcattacaaaatat
ccagtgcttttagaacggattcttcagtacacagaagagggcacacaggaacatgccgat
atctctgctgctctgtctctggtgcgagagatgatttcagcagtggatgtgcgagtgagc
gagcgagagcagagccagaggctgagcgacgttctcggccgcatggaaagcaaaagttta
gccaggttgaagagcggcgccgcatttcgcaagcacgacatgaccaacggccgaacgctg
cttcaccacggcccgctgctttggaagacggccaccggcagactcaaagatgtgctggct
cttctgctgactgatctactggtattcctccaggagaaggaccagaaatacatctttgct
gctgttgatcagaaatgtccagtgatctccttgcaaaagttgatcgtgagggaggtggct
aacgaggagagaggtatgttcctcatcagtgcctcctccagcggccccgagatgtatgag
gtgcacgcggcgtccaaggacgagcgcaacacctggatgaggcttatccgtgaagcagtg
gtgatttgccatgagaaggaggaggacactgcaagtgagtcagaagaagagcgcagagca
gcagaagccaagaaccagaaaattcagaagctacaagagtctctctacagtcatgaccag
ctgatttgctccagcctggaggagaagctccacatctatgccgagctctcagccatggtg
ggccacagagacatcagcccagagccaaagctgctggtgtgccctaacacagaagaactc
cctaatgctgctgttctgctcaacgctgcacttaaagaggcggagagtctaaaagaagcg
ctgtcgtttcactgtggctccacctcctgtccaggtcctctgcttgtgtctgaggaacag
aacaatagtgatgctactcctcagctagaggctcctgatcctgcttcatcccctcctcct
gtgcctgctgaagaagaaccccaagcagtggatactgtaaggagcgaggaagaggagtcg
agaggagaagacagcctcgagctccagcttcggaatcagagcagtgcaactgacaatcat
aatatgcaccttaagatctgtcagagcgtccagagtttgactcagttgctttacagtttg
caggccgtggtcaccatccaggacagccgctacgaagtgcgtcgtctccttcttctcctg
ctctcaagttccacccaacggatctcccagggttccctgcaggagcaagagcgtcaacgt
gaggcagagaggcagcgtcaggagctggcgagggcaacgcgggaacggcagcagtggacc
cgcgagtgtcaggctcagcatcagcgttttgaagagcgtgaaatggaactggcacagcgt
gagcaacagtgccacgaggaggcccagaggctgcagcgccaacgcgaggagctggaagag
cagcagcaggagtaccagcagagtctggagaggctgagggagggccagcggagcgtggaa
agggagaaggagaaggtgaaaatgcagcagaggatgacagaaagatggaaacatgaacgc
caacacaataccagcatcaagctggaaggtcaccaagggtcaggagatgaaacaaaaagc
ttccatcatggtcatcacagtggcttggatgaggatgggtctgtttacgtaaacgaagca
gtttttctggctccgtccatgaacaatcggcatcttcatcactaccagcatcagtaccag
cataatacacacctgcatccaggttacgtggattcccccagtgcccagaacagtctaaat
tctctgctggctttgtccaatcatacacaccctacaatcagcatgcaagatgagccgtgg
accgaagatgttggtccagcaagccatactaccaggacagcaggagccgtgggcccaggg
atttatcaaggtgatgccctcttggtgacgcaagcctttgtttccatggaaacggagaac
caagatcctgagggagaggagaaaattgtgtatctctaa
DBGET
integrated database retrieval system
