Tachysurus vachellii: 132841636
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Entry
132841636 CDS
T09596
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc02010
ABC transporters
tvc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132841636 (abca1a)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132841636 (abca1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvc02000
]
132841636 (abca1a)
Transporters [BR:
tvc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132841636 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
132841636
NCBI-ProteinID:
XP_060720034
LinkDB
All DBs
Position
2:26114802..26139544
Genome browser
AA seq
2268 aa
AA seq
DB search
MAFSTQLGLLLWKNFTYRRRQTIQLLVEIIWPLFIFFILISVRLHYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEASGAVGNFNNSIINRLLTDTKKILLYSQHDK
SLEGYKGLVRSLRNLQNNAAGFKLKDFLRDNETLSEFLEQNATLSKHAVQQIVEANVNLE
NVLIKGFGVHLRDLCNTTSLEEFVNIADHNVSEMTQKIICQAPADWLDSAESHFLSNLDF
LKPIRKDVRSNPKVVQDVSLATDTLLESLGSLAVELVSMKSWRDLREEIQFLTRNATNSP
NHVYQAVSRIVCGHPEGGGMKIKSLNWYEDNNYKALFGNHNDGDSEPVSAYDDTSTPYCN
NMMKNLESSPISRMIWRALKPLLMGKILYTPDTPATRRIIHEVNKTFQELEVLRDLGGMW
EEMRVKVWDFMENSEEMDLVRTLLQNNASAQFFNARLKGTDWRVEDISQFLSKASEDTRP
LGTAYTWRDVFNETDQAILTISRFMECVNLDKLEPVSTEERLVNKSVRLLDSRKFWAGIV
FPDMQADSSELPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYLQ
DIIEHGIIRALTGSKEKTGVYLQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIIIK
GIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPGV
VYLFLVSFAIVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAKV
VVSLLSPVAFGFGCEYFALFEEQGTGIQWDNLLSSPMQEDNYNLTTSISLMLIDAVLYGI
MTWYIEAVFPGQYGIPRPWYFPLTKSYWCGEKHGWTTASTTNKKENSEAVCIEEVPADLE
PGVYIENLVKVYRHGNKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRTDLSAIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVRFEMDQII
TDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKRDFDL
SLSSCHNSSSTVSYSKNSLKKDDSVSDSSSDAGLGSDHESETTTIDISLISNVIFKHVPS
ARLVEDLGHEITYVLPYEAAKDGAFVELFHEIDDRLVDLGISSYGISDTTLEEIFLKVAD
DNGVDAITSDGTILPIRHRRHAFGDHQSCLKPFTEDDSIDCTDSDGDPESRETDWLGVSD
GKGSHQVKGWSLKRQQFVALLWKRFLYAKRSRKGFFAQIVLPAVFVCIALVFSLIVPPFG
KYPSLELEPSMYEEQYTFISNDVPDDVHTNKLLGVLSDRPAYRGQCAEDGTPGHGSCQIR
ESDWTVPEIPKTISDMFQNRNWSMENPSPLCECSCTEKKKMLPDCPPGAGGLPPPQIKVS
STNTLQNLTGRNISDYLVKTYAQIVGKSLKNKLWVNEFRYGGFSLGARSSQDLPSDEISK
VISHMRTRFNLERGTAADRFLGGLSSFIHGLDTKNNVKIWFNNKGWHSIAAFLNVMNNGI
LRASLPARLNPAKFAIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGG
NEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAVEGVVFFCITVLIQYRFCIKARDISAQLKPISEEDEDVARERQRILGGGGQSDILE
LRQLTKVYKRKQKPAVDRLCVGIPRGECFGLLGVNGAGKTSTFKMLTGDSFITSGEAYLA
GKSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVAEWGIHKLG
LVKYADKSAGSYSGGNMRKLSTAMALIGGPPMVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGSDPRLE
PVMELIEHELPGSTLKEKHRNMLQYQLPSSLSSLARIFSILYKNKDQLHIEDYSVSQTTL
DQVFVNFAKDQSDEDHIKDLFVNKSDAVVDFTQLDAFLVSSKAQETVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctttctccactcagctgggtttgctgctgtggaagaacttcacctaccgacggaga
cagaccatccagctactggtagagatcatctggcctctcttcatcttcttcattctgata
tctgtgcgactccactatcctccgtatgagcagcatgaatgccactttcctaacaaggcc
atgccttcagcgggcactctgccctgggttcagggaatcatctgcaatgccaacaacccc
tgtttccgctatcccacccctggagaggcctctggtgcggtgggcaactttaacaactcc
ataatcaatcggcttctcaccgacaccaagaaaatcctcctctacagccaacacgataag
agtttggaaggctacaaaggactcgttcgatctctgaggaatctacagaataacgctgca
ggatttaagttgaaggactttctccgtgataatgagactctctctgagttcctggagcag
aacgcaacgctgagcaaacacgctgtgcagcagatagtggaagcaaacgtcaacctggaa
aatgtgctgattaaagggttcggggtgcatctgagagatctgtgtaacaccacctcactg
gaggagtttgtgaacatcgccgatcacaacgtctcagagatgacgcagaaaatcatctgt
caggcgcctgctgattggctggacagtgccgagagccacttcctgtccaaccttgacttc
ctgaaacctatacggaaggacgtcagatccaaccctaaagtggtccaggacgtgtctctg
gccacagatacccttctggagagtctgggatctttggctgttgagctggtgagcatgaag
agttggcgtgacctgcgggaggagatccagttcctgactaggaacgccacgaactcaccc
aatcacgtgtaccaagcggtgtcccgcatcgtgtgtggacacccagagggcggaggcatg
aagatcaaatccctcaactggtacgaagataacaactacaaggccctgttcggtaaccat
aacgacggcgacagcgagcccgtatctgcctacgatgacacatctactccatactgtaac
aacatgatgaagaatctggagtcgagtcccatctcacgcatgatctggagagcgctgaag
cctctgctcatggggaagatcttatacacacctgatacacctgccactcgcaggatcatc
cacgaggtgaataaaacgttccaggagctggaagtgctgcgggatttaggaggaatgtgg
gaggagatgagggtgaaagtctgggacttcatggagaacagtgaggaaatggatcttgtg
agaactctgctccagaataatgccagcgctcagttctttaacgccaggctgaaaggaacg
gactggcgagtggaggacatttcacaattcttgtctaaagcctctgaggatacccggccg
ctgggtacagcgtacacatggagagacgtgtttaatgagacagaccaggccattctcacc
atctcacgtttcatggagtgtgtgaacttggacaagttggagccggtgtcaactgaggag
cgtctggtgaataaatccgtgcggctgttggacagtcgcaagttctgggccgggatcgtg
ttcccggacatgcaagccgactcgtctgagcttcctcctaatgtcaactacaagattcgc
atggacattgacaatgtggagcgtaccaacaagatcaaggatgggtattgggaccctggt
cctcgtgctgacccatttgaggatctgcgctacatctggggaggattttcatatctgcag
gacattatcgaacacgggattattcgggctctgacaggcagcaaggaaaaaactggagtc
tacctccagcagatgccgtacccatgttacgtagatgatattttcttgcgtgtgatgagt
cgctcgatgcccctcttcatgacgctggcctggatgtactcagtggccatcattattaaa
ggcattgtgtatgaaaaagaggcacgtctgaaggagaccatgaggattatgggattggat
aacgggatcctgtggctgagctggttcattagcagcctgatcccactgctcatcagcgcc
gccctgctggtcctcattctgaagatgggaaaccttctgccctacagtgacccaggcgtg
gtctatctcttcctggtctcctttgccatcgtcaccatcatgcagtgtttcctgatcagc
acgctgttctctcgggccaaccttgcagccgcctgtgggggcatcatctacttcaccctg
tacctgccctacgtcctgtgtgtggcctggcaggactacgtcggcttcggggctaaagtg
gtcgtgagcctgttgtctccggtggcgttcggattcggttgtgaatactttgcactgttt
gaggagcagggaactggcattcagtgggacaacctactgtccagccccatgcaggaggac
aactacaacctcaccacctccatctccctcatgctaatagatgctgtactgtacggcatc
atgacatggtacattgaggctgtcttcccaggtcaatacggcattcccaggccatggtat
tttcccctcaccaagtcttactggtgcggagaaaaacatggatggacgacagcttccacc
accaacaagaaagaaaattcagaagccgtgtgcattgaagaggtaccagctgatctggaa
cctggggtctacatcgagaacctggtgaaggtgtacagacatggcaacaaactggcagta
gatgacctcactctgggcttctatgagggtcagatcacatccttcctgggccacaatgga
gcaggaaagaccaccaccatgtccattttgactggcctgtttcctcccacatctggcact
gcttacatcatgggaaaagacatccgtacagacctaagcgccatccgtcagaacctggga
gtgtgtcctcagcacaatgtcctattcagcatgttgacagtagaggagcacatctggttc
tatgctcgactgaagggcctgtcagaggagaaggtgaggtttgagatggatcagatcatt
acagatttaggccttcctcacaaacgcaaatctcgtaccagtcagctttcaggaggaatg
caaaggaagctctctgttgctctggcatttgtcggaggatcaaaggttgtgatcctggat
gaacccacggcaggggtcgatccatacgctcgcaggggcatctgggacctgctgctcaag
tatcgtcaaggtcgaaccatcatcctctccactcaccacatggacgaggctgacattctg
ggtgaccgcatagccatcatctctcatgggaagctgtgttgtgtgggatcctccctgttc
ctgaagactcagctgggcactggatactacctaacactagtcaagagggattttgacctg
tctctgagctcatgtcacaactccagcagcaccgtgtcctattccaagaacagtctcaag
aaggatgacagcgtttctgacagcagctctgatgcaggcctcggaagtgaccatgaaagt
gaaactaccaccattgacatctccctgatctccaacgtcatcttcaagcatgttccttca
gccagactggtggaggatctgggccatgagatcacctatgtgctgccttatgaagcagcg
aaggatggcgcctttgtggaactcttccatgagattgacgatcgccttgtcgacctcggc
atctccagctacggcatttcggacaccacgcttgaggagatctttctcaaagttgcagat
gataacggagttgatgctataacttcagatggcactattcttccaataaggcatcgtcgg
catgcatttggagaccatcagagctgtctgaagcccttcacagaggatgacagcattgac
tgcaccgattcggatggtgacccagaatcccgtgagacagattggttaggagtctctgat
ggaaaaggctcacaccaggtcaaaggctggagtctgaagaggcagcagtttgtggcttta
ctctggaaacgcttcctatatgccaaacgctctcggaaaggattctttgctcagattgtc
cttccggctgtgttcgtgtgcattgccctagtcttcagtctaattgtaccaccttttgga
aagtacccaagcctggagctggagcccagcatgtatgaggagcagtacaccttcatcagt
aacgatgtgccagacgatgtgcacactaacaagctacttggagtgttatcagacagaccg
gcctacagagggcagtgtgcagaggatgggacccctggacatgggtcgtgtcaaataaga
gaaagcgactggactgttcctgagattcccaagaccatatcagacatgttccagaacaga
aactggagcatggaaaacccatcacctctgtgtgagtgcagctgtactgagaagaagaag
atgttgccagattgtccaccaggagcaggaggtctgcctccaccacagatcaaagtcagc
agtacaaacacactgcagaatctaactgggaggaacatctccgactacctggtgaagacg
tacgcacagattgttggaaagagtttgaaaaacaaactgtgggtgaacgagttcagatat
ggtggattctcattgggtgccagaagttcacaagacctgccttcagatgagatctccaag
gtcatctctcacatgcggactcgcttcaacttggaaagaggcactgcagcagacaggttt
ctgggaggtttatcgagcttcatccatggtctggacaccaagaacaatgtcaagatctgg
ttcaataataaaggttggcacagcatcgctgctttcctcaacgtgatgaacaacggtatc
ctgcgtgccagccttcctgccaggctaaaccctgctaaatttgctatcaaagcttttaac
caccccctgaacctgactaaagagcagctctctcaggtggccttgatgaccacctcagtt
gatgttctggtctccatctgcgtcatcttcgccatgtccttcgtcccagctagctttgtg
gtcttcctcattcaggagagagtgaataaagccaaacatatgcagttcatcagcggagtt
cagcctttcctctactggcttgcaaactttgtgtgggatatgtgtaactacatcgtccct
gcaaccctcgtcatcatcatcttcgtctgcttccagcaggaggcctatgtctcttccacc
aacctgcctgtccttgccctgcttttactcctttatggctggtccataactcctctgatg
tatccagcatcgttcttctttaagatccccagcacggcctacgtggtcctgaccagcgtc
aacatcctcattggaatcaacggcagtgtgtccaccttcgtcttggagctttttggtggc
aacgagattggcggcataaatgacattttgaaaaatgtcttcctgatcttccctcacttc
tgcctgggacgtgggctgattgacatggtgaagaaccaggccatggctgatgctctggag
agatttggtgagaatcggttccgttctcctctggcatgggacatggtgggtaagaatctc
ttcgccatggcagtggaaggtgtggtcttcttctgcattactgtgctcatacagtatcgc
ttctgcatcaaggccagagacattagtgcacagctgaagccgatcagtgaggaagacgaa
gatgtggccagggagaggcaaaggatacttggtggaggtggacagagtgatatcttggag
ctcagacagctgaccaaggtctataagaggaagcagaagcctgcagtggaccgactgtgt
gtgggaattccacgtggagagtgttttgggttgcttggtgtaaatggtgctggaaaaacc
agtaccttcaagatgctcactggggattcattcatcacgagcggagaggcttatttagca
ggcaagagcgtgctgacggagatcgatgaggttcatcagaacatgggctactgccctcag
tttgacgccatcaacgacctgctgaccggccgagagcacctggagttttacgccattctg
cgtggagtcccggagaaagaagtgtgtgaggtggccgaatgggggatccataagctgggt
ctggtgaagtacgcagacaaatctgcaggaagctacagtggaggaaacatgcgcaaactc
tctacggccatggctctgattggaggcccacccatggtgttcctggatgaacccacaact
ggtatggatcctaaagcacgacgcgctctgtggaactgcattctcagcatcattaaagag
ggacgttctgtggttctaacctcacacagtatggaggagtgtgaggctctgtgcactcgc
atggccatcatggtcaatggcaggtttcgttgcctgggcagtgttcagcatctaaagaac
aggtttggtgacggctacaccatcatcctgcgcgtggctggttctgatcctcggcttgag
ccggtgatggagctgatcgagcacgagctacccggcagcacgctgaaggagaaacacagg
aacatgctgcagtatcagcttccatcgtcactctcctcactcgctcggatcttcagcatc
ctgtataagaacaaagaccagctccacatcgaagactactctgtctcacagaccacatta
gaccaagtatttgtcaattttgccaaggaccaaagtgacgaggaccacatcaaagacctt
ttcgtaaacaagagcgatgccgtggtggacttcacacagctggatgcgttcctcgtgagc
tccaaagcgcaggagacagtggtgtga
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integrated database retrieval system
