Tachysurus vachellii: 132841765
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Entry
132841765 CDS
T09596
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc02010
ABC transporters
tvc04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132841765
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132841765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvc02000
]
132841765
Transporters [BR:
tvc02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132841765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
132841765
NCBI-ProteinID:
XP_060720264
LinkDB
All DBs
Position
2:31654854..31794185
Genome browser
AA seq
2231 aa
AA seq
DB search
MSLLVQLRLLLWKNFTLRKRQKLRLVIELIWPLFLFFILVWVRSTNHPVYKGQCHYPNKP
MPSAGVLPWLQGMVCNIQNPCISEPTPGEAPGQVNNFNNSIIAKALIEVQTLLADSSLLS
NAKRLSEDFNQWTSILENFNTAKGRSIPLRSVLRDNETLSEYLKSNLSLSSSTVQRLISV
RLRLNQLPALASETDLRSTLCSSSVDRFLEFNSTIQRQEFQNVTCFLSPSQLRQTRAVLV
QNLDNRKLIAAVPLSLNMNPADFATLLASTSSNASPLASQVTKLQTTAIQNAVKSLDFRS
NPFGSLTLLMCGGNSSSNTSSAKPIRLPAQATLSLSSNSSLGNSSDFCQNLIETMKGTSA
LRLFWTSLRPLLQGRVLYTPDTPFTRRVMAKANSTFNTLAKIGELADAWLENEDEIWNFF
QNSTQINTIRALLQNPLFSSVLDQRLNGSKLSSAVIGNFLFNGDEKDRPAGMPSFDWRNI
FNITSQVVRLIKQVMGCFDLNKFEAMASESVLVERALKLLDQEKFWAGVVFTDLDSGSPS
LVRYKIRMDVEETERTDKIKDRSWFPSARDNPFNDLRYVRGGFLYLQDMLDHAIIQTHTG
VRETLGVYVQQMPYPCVVDDAFVSSISTILPMFLVLAFMYTVCQTIKGLVLEKELRLKEV
LRVVGVRNGALWFSWFTENIVLLTVPCALISIMVKYGKVLRYSDPSVIFVFLMVFCLATV
MQSFFISVFFSRANLAAACGGLIYFLLYLPHVLCYAWRDVMTFRAKLGTSLLSCVAFGYG
CENFARYEEQGIGIQWKNIMLSSQDDDPYTFIVSIIMMLIDALLYWILTWYIENVFPGQY
GIPRPWYFPLTFSYWCGTPAGADIEQDSLDALEEQNAYLEKPPSNLKAGVSIRNLVKVYK
TGKKLAVDKLSLDFYKDQITSFLGHNGAGKTTTMSILTGLFAPTSGTAYINGFDIRKDMD
SIRKTLGMCPQHNVLFNDLTVEEHIYFYARLKGRNSKEVKQEIDQMIKDVGLPHKRKDLA
KNLSGGMQRKLSVAIAFVGGSDVVILDEPTAGVDPYARRGIWELLLKYKSGRTIILSTHH
MDEADVLGDRIAIISHGKVCCCGSSLFLKKTYGSGYYLTLVRTNQEIMTSQRYTGGTQLG
DASSLDEGIGSGSISTMETADVADVTSVIRLHIPEAEFLEVIGQELVYVLPYAGSKDGSF
ASLFKELDLEKERLGISSYGISDTSLEEIFLKVAEETGVDVETTEKRETLQRDWKRSSKR
SRSDSMSLAMERRESAASKQEKKGRFLNRVKDDQLPKCVNGKGSYVITGWHLIRHQFLAL
FIKRFHHARRSRKGIIAQVVLPALFVCLSLIFSLILPPFVEYPNLELQPWMYGKPQNTFY
SADRMDIDQAMRVTHALLSEPGFGTRCMEGNPIAKYPCTPSGGTDWFTPSVDPSILEIFK
NGNWSMQNPSPDCQCSTPQRNIMLPDCPPGAGGLPPPQKTQNTTDTLQDITARNMTDFLL
KTYAKSGKIRYGGISVGAINSQVILNESEITTLLSDLKILFNSSQSNITEKFFQDLEILL
VDLGTKDNVKVWFYNQGWHAIVSFLNVATNAILRGNLPAGVQPKLYGISAFNHPLNLTKQ
QLTATLMSSSTDVVVAICVIFAMSFIPASFVLFLIQERVSKAKHLQFVSGVNPAAYWVAN
FTWDMCNYVVPCLIVIVIFLCFQQKAYVSPQNLPALVLLLVLYGWAITPMMYPASFVFSI
PSTAYVVLTCINLFIGINGSIATFVMELFNDPNITDINNIVKQVLLIFPHFCLGRGLIDM
AKNQAMATLFLGLGENRFEDPLSWNMVGKNLFAMGIQGVVMFGFTLLIQYKFFCKPRLVS
VLPRSEGEEDEDVARERERVERGNAQNDLLRICDLTKVYSGKKIPSVDRITVGVPAAECF
GLLGINGAGKTTTFKMLTGDIQPSGGEAFLSVYSIRTEMSQVHQNMGYCPQFDAIDDLLT
GREHLEFYARLRGVPEREVTTVAEWGIQKLGLVKYSNKSAGTYSGGNKRKLSTAMALIGC
PPLVFLDEPTTGMDPKARRFLWDCILSVIKEGRSVILTSHSMEECEALCTRMAIMVNGQF
KCLGSLQHLKSRFGEGYTVIVRVRGGATDLSTVEEFVNEAFPGSVLKEKHHNTLQYQMPY
SEGALSHIFSQFSKSQHSLGVEDYSVSQTTLDQVFVNFARQQHNAEDGVYENPVDLSDEI
PMQSHTRINTE
NT seq
6696 nt
NT seq
+upstream
nt +downstream
nt
atgagtctcctggtacagctcaggcttctgctctggaagaacttcactttgcgcaagaga
cagaagctgcggttggtaatcgagctaatatggcctctgttcctgtttttcattctggtg
tgggtgagatcaaccaatcatcctgtctacaaaggccagtgtcattatcccaacaagccg
atgccctccgctggggtgttgccatggttacagggcatggtctgcaacatccagaatccg
tgtatcagtgagccgacgcctggagaagcccctggccaggtcaacaacttcaacaactcc
atcattgcaaaggcattaatagaggtacagactctcttagctgactcctcactgctgtct
aatgctaaacgtctgtctgaggatttcaaccaatggacttctatccttgagaatttcaat
acagccaaaggtcgctcaattccattgcgcagtgtgctgagagataatgagacgctctcc
gagtaccttaagagcaacctgtcattatcaagttcaactgtccagaggctgatcagtgtg
agactccgactcaatcagttacctgctcttgcaagtgagacggatttgcgctccactctg
tgcagctcatcagtcgatcgcttcctggagtttaactcaacaattcagcgacaggagttc
caaaacgtcacatgcttcctgtcacccagtcagcttcgtcagaccagagctgttcttgtt
caaaatctggacaacagaaagctcatagctgctgtccctttatcattgaatatgaaccct
gcagattttgccactctgctggccagcaccagttccaatgcatcccctctggcaagtcag
gtaacgaaattgcagaccacagctatccaaaatgccgtgaaatctctagacttccgctca
aatcctttcgggagtttgactctgttaatgtgtggtgggaattcaagctccaacaccagc
agtgcaaagccgattcgattgccagcacaagccacactttcactaagctccaactcatct
ctcggcaactcaagtgatttttgtcagaatttgattgaaactatgaaaggcacatccgcc
ctacgtcttttctggactagtctccgcccacttcttcaaggacgagtcctctacactcca
gacacaccctttacacggcgggttatggcaaaggccaacagcaccttcaacactctggct
aaaattggcgaactggccgacgcttggctagaaaacgaggacgagatctggaacttcttc
cagaacagcacgcaaatcaacacaatccgggctctgctgcagaacccacttttttcgtca
gttcttgatcagcggctgaacggaagcaagttgtcttcagcagttatcggtaattttttg
ttcaatggtgatgaaaaggaccggcctgcaggaatgccatcatttgactggagaaacatc
ttcaacatcaccagtcaggttgtaagactcatcaagcaagtcatggggtgcttcgatctg
aacaagtttgaagccatggccagtgagagcgtgttagtggaacgtgccctcaagctgctg
gatcaggagaagttttgggctggagtcgttttcacagacctggactcaggcagcccatcg
ctcgtcagatataagatccgcatggacgtcgaggaaaccgagaggacggataagattaaa
gacaggtcctggtttccgtcggctcgtgataacccgtttaatgacctacgctatgtgaga
ggaggctttttgtatctgcaggacatgctggaccatgcgatcatccagacccacacgggg
gtcagggaaactctgggtgtctatgtgcaacagatgccttatccctgcgttgtagatgat
gcctttgtgtcatccatttccaccatcctgccaatgttcctggtgttggccttcatgtac
acggtttgccagaccatcaaaggtctggtcctggagaaggaactgcggctgaaggaggtt
ctccgagtggtgggtgtgagaaatggagcgctctggttttcctggttcacagagaacata
gtattgctaacagtgccatgcgcactgattagcataatggtaaagtatgggaaggttctg
agatacagcgacccatccgtgatcttcgtgttcctgatggtgttctgcctagccacagtc
atgcagtctttcttcatcagtgtctttttctcacgagcaaatctggctgccgcctgtggg
ggactcatctacttcctcctctacctaccccatgtgctctgttatgcctggagagacgtc
atgaccttccgagccaagcttggcacgagtttgctgtcatgtgtggcatttggttatggc
tgtgagaattttgcccgatatgaggagcagggcattggcattcagtggaaaaacatcatg
ctcagctctcaggatgatgacccttacaccttcattgtctctatcatcatgatgctgatt
gatgcactgctctactggatactcacatggtacatcgagaacgtcttcccagggcagtat
ggaattcccaggccttggtatttcccattaaccttttcttactggtgtggtacaccggct
ggggcagatatagagcaggattctcttgatgcactggaggagcagaatgcttacctcgaa
aagcctccctctaacctgaaagctggtgtgtctataaggaacctggtgaaggtgtataag
actggaaagaaactagctgtggacaaactcagtctggacttctacaaagaccagatcaca
tcattcttaggacataatggtgcaggaaaaactaccaccatgtccattctgaccggcttg
tttgccccaacgtccggcacggcttatattaacggctttgacattcgcaaggacatggac
agtatacgcaagacgcttggcatgtgcccacaacacaatgtcttatttaacgacctcact
gtggaggagcacatttatttctatgcccgtctcaaggggaggaactccaaggaagtcaaa
caggaaatagatcaaatgatcaaagacgtcgggctgccgcataagcgcaaggatcttgcc
aagaacctttcaggtgggatgcagaggaagttgtcggttgccatagcgtttgtgggcggg
tctgacgtggtgattctggacgagccgacagcaggagtggatccatacgcccggagggga
atctgggaactgctgctcaaatacaaatcgggccgtaccatcattctctccacgcaccac
atggacgaggcagacgttttgggtgatcgcatcgccatcatctcccatggcaaggtctgc
tgctgcggatcttccctcttcctaaagaaaacttacggcagcggatattaccttacactt
gtacggaccaatcaggagataatgacatcacaacgttacacagggggcacgcagctcggt
gatgcttccagtttagatgaagggatcggttcaggaagcatcagcaccatggagacagca
gacgtagcagatgtcacttctgtcatacggttgcacatcccggaggcggagttcctagag
gtgattggtcaggagctggtttatgttctgccatatgctggctcaaaagatggcagcttt
gcttcgcttttcaaagaactggatttggaaaaagagaggctggggatcagtagctacggg
atctcagacaccagcttagaggagatatttctgaaagtggcagaagagacgggcgttgat
gtggaaacgactgagaagagagagacacttcagagagactggaaacgaagctctaaaagg
tctagatcagatagcatgagtttagccatggagagaagagagagtgcagcttccaaacaa
gaaaagaaaggaaggttcctaaatcgagttaaagatgatcaactgcctaagtgtgtgaat
ggcaaaggttcttatgttattaccggctggcatctgatcaggcaccagttcctggcgttg
tttataaagcggtttcaccatgcaagaagaagcaggaaaggaatcattgctcaggtggtc
ctcccagcgctgtttgtttgtctgtctttgattttctctctgattctcccaccatttgtg
gagtaccccaatctggaactgcaaccctggatgtatggaaagccacaaaacactttctac
agtgctgacaggatggatatagaccaggcaatgagggtaacacatgcgctcctttctgaa
ccaggctttggcacccgatgcatggaaggcaaccctatagctaaatacccatgcactcct
tctggaggcacggactggtttactccttcggttgacccctccattctcgagatctttaag
aacggaaactggagcatgcagaatccatcgccggattgccaatgcagcactccccaacgt
aacatcatgctgccagactgccctcctggtgctggaggattaccgccaccgcagaaaacg
cagaacacaacagacactctgcaggacatcacagcacgaaatatgactgacttcttgcta
aagacctatgctaagtctggaaaaataaggtatggagggatctctgttggagctataaac
tctcaggtcatacttaatgaatctgagataactacacttctgtcagacctcaagatactc
tttaactcatcacagagcaacataactgagaagttctttcaggacttggagattttactg
gttgatttgggaacaaaggataatgtaaaagtgtggttctataaccagggatggcacgca
atagtatcgttcctgaatgtggccacgaatgccatcctcagagggaatcttccagctgga
gtgcagcccaaactatatggcatttcagcctttaaccatccgctaaacctcaccaaacag
cagctcaccgccacattgatgtcaagctctacagatgtggtggtggcgatctgtgtgatc
ttcgccatgtcctttatccctgccagctttgtcctatttcttattcaagagcgtgtcagc
aaagctaaacacctgcagtttgtcagtggagtcaatcctgctgcgtactgggtggccaac
ttcacctgggacatgtgtaattacgtcgtcccatgtcttatcgtcatagtcatcttcctc
tgcttccaacaaaaagcctacgtttcgcctcagaaccttcctgcacttgttctgctgctg
gttctctatgggtgggcaatcacacccatgatgtacccggcctcgttcgtgttcagcatt
cccagcacggcatacgtggttctcacctgtatcaatctcttcattggtatcaatggcagc
attgccaccttcgtcatggagctgtttaatgacccgaacattactgatatcaacaacata
gtgaagcaagtgttactgatcttccctcacttctgtctgggtcgtggcctcattgacatg
gccaagaatcaggccatggcaacactcttcctcggtctgggagaaaataggtttgaggat
cccctaagctggaatatggtggggaagaatctgtttgccatggggatacaaggtgtagtc
atgttcggcttcaccctcctcatccaatataagttcttctgtaaaccccggttagtctct
gtgttgccaagatctgaaggagaagaggatgaagacgtagctcgagagcgtgagcgagta
gagagaggcaatgcccaaaatgatctactccggatttgtgacctcaccaaggtgtactcg
ggtaagaagattccatcagtagataggataactgtgggtgtcccggctgctgagtgcttt
ggcctactgggtataaatggggcaggaaaaaccacaacttttaaaatgctgactggagac
attcagccctcgggtggagaagccttcctcagtgtatacagcattcggacagagatgagc
caggtccatcagaacatgggatattgtcctcagtttgacgccatagatgacctcctaaca
ggacgagagcatctggagttctacgcccggctcagaggggtgccagagagagaggttact
acggtagcagagtgggggatacagaaactgggtttggtaaaatactccaacaaatctgca
ggtacctacagcggagggaacaaacgcaagctgtctacagctatggctctgattggctgc
cctcctcttgtctttctggatgagccgaccacagggatggatcctaaagctcgccgtttc
ctgtgggactgtatcctcagtgtgatcaaagagggtcgttctgtcatcctcacctcacac
agtatggaggagtgtgaagctctgtgtactcggatggccatcatggtaaatgggcagttt
aaatgtctgggcagccttcaacatctaaaaagcaggttcggcgaaggttacactgtgata
gtgcgcgtcagaggtggtgccactgatctgagcacggttgaggagtttgtgaatgaggcg
ttcccgggcagcgttctgaaagagaaacatcacaacacgctgcagtaccagatgccctac
agtgagggcgctctctcacatatcttcagccagttcagcaaatcccagcactcactggga
gtggaggactactcagtgtctcaaaccacactggatcaggtgtttgtgaattttgcacgc
caacagcacaatgctgaagatggtgtctatgagaatcctgtagatctgagtgatgaaata
ccaatgcagtcccacacacgcataaacactgaataa
DBGET
integrated database retrieval system
