KEGG   Tachysurus vachellii: 132841956
Entry
132841956         CDS       T09596                                 
Symbol
kdm4c
Name
(RefSeq) lysine-specific demethylase 4C isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tvc03036]
    132841956 (kdm4c)
Enzymes [BR:tvc01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     132841956 (kdm4c)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     132841956 (kdm4c)
Chromosome and associated proteins [BR:tvc03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    132841956 (kdm4c)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD Tudor_5 Rad9_Rad53_bind PHDvar_NSD
Other DBs
NCBI-GeneID: 132841956
NCBI-ProteinID: XP_060720594
LinkDB
Position
2:complement(38479812..38489641)
AA seq 1298 aa
MAGVGASASANPACKIMTFRPTLEEFCDFNKYLVYMESQGAHRAGLAKVIPPKGWKPRRT
YDDIDDLVIQAPIQQMVAGQSGLFTQYNIQKKPLSVQEFRRLANSDKYCTPRYLNYEDLE
RKYWKNLTFVPPIYGADVSGTLYDEDVEEWNIGHLNSILDVIEEDCGVSIQGVNTPYLYF
GMWKTSFSWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLATGFFPNSFKSCEAFL
RHKMTLISPSVLKKYSIPFDKITQEAGEFMITFPYGYHAGFNHGFNCAESTNFASLRWID
YGKLATQCTCSKDMVKISMDPFVRRFQPDRYQAWTQGKDSCSLDHTLATPSSTPELQTWL
QRRRRAKTNKRASYPCTRSKRLKTVQQPQQVVTRISEEGDEAKEEEEQKAHNALRLSGPA
SLCQQVCFVKVTRVKSNLLVQSSKRFPTQAPPPEAQEALGRREPLTSADQAPGSDVDDTP
DSEQTSERSCVAKFSSSKSPSENQLPCKGAVHEENHSAGDPSSTAVTTESCELPEHSGAP
SSDMPLLTPEVTEDLEGRKSPNLSSEMPFLTLAVQSSDNNTLLNPNEAENSTSPQKAQYP
DRCLNPFREDVSQSHSSDPETKERIKKKDGNADGSASINLLSKAGTELFGCSSVKDSLIS
ADANTLSSESPSTSYDPNPPNKPSSPLDEAEFTSSTLPNLFEESSSIWKNVSYQNPEVSE
LVPYAMWAEPLCQQVKCPDPSDFPEKSLTFTDLEPSVVHHSGAEHLGSPDRPQRSDSSSE
SSEADSLSESEYGDSGIEPGEIRTYTLPTVKRKTAKSWRHPLRKPTARAVPSAVKQQVNS
DDEHMEECSAEEELQEADAWARPLVHLWHSRKCHFPSEREYNSTAAKTVPHCAVCTLFMP
YYQVYDDVKVSHQPEEMKDESRPEVTLPVGEATARSRPLIPEICFAYREGSCPPNTLLEE
DGSSPLVACTHCCVQVHASCYGVTAQDVTREWTCDRCSCGDLTAECCLCNLRGGALKPTT
DSRWAHVMCAVGLPEAKFIDIVKRSPIELSAVPAQRYKLKCIYCHKRMKKIAGACIQCSC
GRCPTSFHVTCAHAAGVTMEPDDWPYVVFIICHRHQSRSSNTKSKVSRTELTEGQTVIAK
HKNLRYYSCRIASVTAQTFYEVMFDDGSFSNDTFPEDIVSRDCVQLGPPEVGEVVQVKWS
DGLFYGAKYLGSNTTYMYQVEFEDGSQVLAKREDIYTLDEDLPKKVKGRLSTASTMRFED
AFFTTQGERKRQRTPNSRFQKDYVADPNPRTSNCGKSN
NT seq 3897 nt   +upstreamnt  +downstreamnt
atggcgggtgtcggggcgagcgcctctgcaaaccctgcatgcaagattatgacttttcgc
cccaccctagaggagttttgtgattttaataagtatctggtgtacatggagtctcaggga
gcgcaccgtgccggtctggcgaaggtgattccgccgaagggctggaagccgagacgcacc
tacgatgacatcgatgacctcgttatccaggcgcccattcaacagatggtcgctggccaa
tcagggctcttcactcagtacaacatccagaagaagccgctcagcgtgcaggagttccgc
aggctggcgaatagcgacaagtattgcactccccggtacctgaattacgaggacctggag
aggaagtactggaagaacctgacgttcgtgccgcccatatacggcgcggacgtgagcggg
acgctgtacgacgaggatgtggaggagtggaatatcgggcacctgaactccatcctagac
gtgatagaagaggactgcggcgtctccatccaaggcgtgaacaccccctacctgtacttc
ggcatgtggaagacgagcttctcctggcacacggaggacatggacctctacagcatcaac
tacctgcatttcggagaacccaagtcctggtacgccattcctccggaacatgggaagcgt
ctggagcgattagccacaggttttttccctaacagctttaagagttgtgaagcttttctc
agacacaagatgaccctcatatcgccttcggtgctgaagaaatacagcatcccgttcgat
aagataacacaagaggccggagagttcatgatcacgtttccgtacggctaccacgccggc
ttcaaccacggcttcaactgcgccgagtccaccaacttcgccagtctgcgctggattgac
tacggcaaactcgccactcagtgcacatgcagtaaagacatggtgaagatctccatggac
cccttcgtgagacgtttccaaccagatcgttatcaggcgtggacgcagggcaaagactcc
tgctcgctagaccacactctggccacgcccagctccacgcccgagctccagacgtggctc
cagagacgccgcagagccaaaaccaacaaacgagcgagctatccttgcacacgctccaaa
cggctgaaaaccgtgcagcagccgcagcaggtcgtcacgaggataagtgaagagggagac
gaagcgaaagaggaggaagaacaaaaagcccacaatgcattgcgcctctcaggacctgct
agtctgtgccaacaggtttgttttgtcaaggtcacacgagtcaagagcaatttattggtc
cagtcgtctaaaagattcccgactcaagcgccgccccctgaagcacaagaagccttagga
agacgtgagcctctcacctcggccgatcaagctcctggttctgatgtagacgacactccg
gactctgagcaaacttctgaacgttcctgcgttgccaaattctcaagcagcaaatcaccg
tcggaaaatcaactcccctgtaaaggtgcagttcatgaggaaaatcattctgctggagat
ccctcgagtacagcagtcactactgaatcgtgtgaactccccgaacattcaggagctccc
tcgtccgacatgccgttactcacacctgaggtcacggaggatctcgagggaagaaaatct
ccaaatctgtcatctgaaatgcccttcctgaccctcgccgtccagtccagcgacaacaac
acactactgaatcctaacgaagcggaaaattccacctcacctcagaaagcacagtatcca
gatcggtgcttaaatccgttccgagaggacgtcagtcagtcgcacagctccgatccagag
actaaggaacgaatcaaaaagaaagatggaaacgcagacggatctgcatccattaatctg
ctttccaaagccggtactgagctgtttggatgtagttctgtgaaggattctctgatatca
gctgacgctaacacgctttccagtgagtctccatccacgtcttatgacccaaacccaccg
aacaagccctcgtctcctctggacgaagccgaattcacgtcttctacgctaccaaacctc
tttgaggaatcctcttccatctggaagaacgtaagctaccaaaatcccgaagtgtccgag
cttgtgccttacgccatgtgggcggagcctctgtgccagcaggtgaagtgccccgatcct
tcagactttccagagaagagcctgacatttactgatctggaacccagcgtggttcatcat
tctggtgctgaacatcttggttctccagacaggcctcagaggtcagacagcagcagcgag
tccagcgaggccgactccctgagcgagtcggagtacggagattcgggcatcgagccggga
gaaatccgcacctacaccctgcccacggtgaagagaaagacggccaaaagttggcgccac
ccgttgaggaaaccgacagcgagggcggttccgagcgccgtgaagcagcaagtcaacagt
gacgatgaacacatggaggagtgcagcgcggaggaagaactgcaggaggctgacgcctgg
gcgagacccctggtccatctctggcacagcaggaagtgtcacttcccgtcggagagagag
tacaacagcacagcagccaagacggtgccgcactgcgccgtgtgcacgctgttcatgcct
tactaccaggtttacgatgacgtgaaggtttctcaccagcctgaagagatgaaagacgaa
agcagacccgaggtcacgctgccggtcggggaggccactgcgaggtcgcgacctctgatt
cctgaaatatgcttcgcgtaccgcgagggctcgtgtccccccaacacgctcctggaagaa
gacggatccagtcctctcgtggcctgtacacactgctgcgttcaggttcacgccagttgc
tacggcgtcaccgctcaggacgtaacccgggagtggacgtgtgaccgctgttcctgtgga
gatctcactgctgaatgttgtttatgtaacctgaggggtggtgcgttgaagccaacaaca
gacagcaggtgggctcatgtgatgtgtgctgtggggcttcctgaggccaaattcattgat
atagtgaaaaggagccccatcgaactcagcgccgtccctgcacagagatacaaactgaaa
tgtatatattgccataaacggatgaagaagatagcgggcgcgtgtatccagtgctcctgt
ggccgctgtcccacctccttccacgtcacgtgcgctcacgccgccggcgtcaccatggag
cctgacgactggccttacgtggtgttcatcatctgccacaggcaccagtcacggagctcc
aacactaagtcgaaggtgagccgaacagagctgactgagggccagactgtgatcgccaag
cacaagaacctgcgctactacagctgtcgcatcgccagcgtcacggcacagacgttctac
gaggtcatgttcgacgacggctcgttcagcaacgacaccttccccgaagatatcgtgagc
agagactgtgttcagctcgggcctccggaggtcggcgaggtcgtgcaggtcaagtggtcc
gatgggcttttttatggggctaaatacttgggctctaacactacatacatgtatcaggtg
gagtttgaggacggttctcaggtgctggctaagagagaggacatttacaccctggatgag
gacctgcccaaaaaggtcaaaggtcgcctctctacagcctccaccatgcgtttcgaggac
gcgttcttcaccacgcagggcgagcgtaagagacagcgcacacccaactctcgcttccag
aaggactacgtcgccgacccgaaccctcggacctccaactgcggcaaaagtaactga

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