Tachysurus vachellii: 132842621
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Entry
132842621 CDS
T09596
Symbol
gga3b
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA3 isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
tvc
Tachysurus vachellii
Pathway
tvc04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
132842621 (gga3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132842621 (gga3b)
Membrane trafficking [BR:
tvc04131
]
Endosome - Golgi transport
Others
GGA
132842621 (gga3b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Alpha_adaptinC2
GAT
GGA_N-GAT
DASH_Dad4
VCIP135_N
cas_Cpf1_2nd
Csm1_N
HBM
DUF2096_N
DUF6744
Motif
Other DBs
NCBI-GeneID:
132842621
NCBI-ProteinID:
XP_060721377
LinkDB
All DBs
Position
3:complement(4128125..4138695)
Genome browser
AA seq
702 aa
AA seq
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MAYQEGETLESWLNKATHPTNRQEDWEYIIGFCDQINKELEGPQIAVQLLVHKIHSPQEW
EALQALTVSEHATHTHTHTHTHTHTALVGHVLYLPQVLEACMKNCGRRFHNEVAKYRFLN
ELIKVVSPKYMGESVSERVKTKIIEMLYSWTVAFPNEAKINEAYQTLRRQGLISSDPELT
VDKTLIPSPPSRPKNPVFDNEDMGKLLAELLRSKNPEDLQEANRLIKNMVKEDDVRVQKM
TKRMHTLEEVNNNVKLLSEMLSHYDHDRSSDADRDLIKELYERCDKLRRTAFKMATDTED
HDASLGEILQASDELEKVISLYKKVVKGEMEGDNTEEQKPAHGKDCETDTLIDLAGLDEP
PAPQTAPPTQVSRAPLSNQTACSIPVIPPPPRRLAGGSASQTSSPIHRASEPSPAHSLLL
DDELLSLGLNEPPPVQSRPNLEDASSQWTSLQAPAPPGLDLFSSGAAAAPSTGFPPTHTS
GHSTHSTQPDAVTQGLQDLAMLNLGEVKSVSGQPVMAAGVSLGLAMPSSLSYSNPFISST
MPGSPLRTLQGNPVRSEASLSNLHVPLESIKTSKALPVTAYDKDGVRVLLHFGSECPPGR
ADVLVIVVSMLNTAPLTVKNIELQAAVPKSMKVKLQSPSGTELAPFSPVLPPSSITQVML
LANPLKEKVRLRYKLMFLLGERQYCEVGELDQFPPPERWGNL
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccaggaaggagagacgcttgaatcgtggcttaacaaagccactcacccgact
aacagacaggaggactgggagtacatcatcggcttctgtgaccagatcaacaaggagctg
gaaggtccacagattgctgtacagcttcttgttcacaaaatccactcgcctcaggaatgg
gaggctctccaggcgttaactgtgagtgaacacgcaacacacacacacacacacacacac
acacacacacacacagctctggtcggacatgttctttatctcccacaggtgttggaggcc
tgcatgaagaactgtggcagacgatttcacaacgaagtggccaaatacaggtttttaaac
gagctcatcaaagtggtttcccccaagtacatgggagaaagtgtctctgagagggtgaag
actaagattattgaaatgctgtacagctggactgtagcgttccctaacgaggccaaaata
aatgaagcgtaccaaacactgaggagacaaggactcatctcatcagatcctgagctgacg
gttgataaaactctgatcccgtctccaccttctcggcccaaaaacccggtgttcgacaac
gaggacatgggcaagttgttggcggagctgctccgcagtaaaaaccctgaggacctgcag
gaggctaacaggctgattaagaacatggtgaaggaggacgatgttcgggttcagaaaatg
accaaacgcatgcacacgctggaggaggtgaacaataacgtcaagctgctgagcgagatg
ttgagtcattatgaccatgacaggtcatcagacgcagaccgtgacctcatcaaggagctg
tatgagcgctgtgacaaactgagacgcacagcctttaagatggccacagatacagaggac
catgacgctagtttaggtgaaattcttcaggccagtgatgagctggaaaaagttataagc
ctgtataagaaggtcgtaaagggtgagatggaaggagacaacactgaggaacagaaacca
gcacacggaaaagattgtgagacagacacactcattgatctcgctggtctggatgaacct
cctgctccccagacagctccgcccactcaagtctccagagcacctttgtccaatcagacc
gcctgtagcattcccgtgatcccgccccctcctcgccgattggctggaggatctgccagt
cagaccagcagccccattcacagagcctcagagccgtctccggcccactcgctgctgctg
gacgacgagcttctgtccctcgggttgaatgaacctcctccggtacagagcagacccaac
ctggaggacgcgtccagccagtggacgtctttacaggctcctgctcctcctggacttgac
ctgttctccagtggagcggcagcagcaccaagcaccgggtttccacctacacacacctca
ggacactccacacactccacacagcctgatgcagtgactcaggggctgcaggatctcgcc
atgctgaacctgggagaggtcaagagtgtctcaggtcagcccgtcatggccgccggtgtt
agtttgggtttggccatgccttcctctctctcttattccaatccctttatcagctccaca
atgcccggctcgcccctgcgcactctacagggaaaccccgtgcgctctgaagcatccctc
agtaacctacatgttcctctcgaaagcatcaaaaccagtaaggcccttcctgtgactgcg
tacgataaagacggagtgcgtgtcctcctgcacttcggctctgagtgtcctcctgggaga
gcggacgtcctcgtcatcgtggtgtccatgctgaacacagctcctctcacagtgaagaac
atcgagctacaggctgcagtgccgaagtctatgaaggtgaagcttcagagtccatcagga
actgagctggcgccctttagccctgtcctgcccccttcctccatcacacaggtcatgctt
ctcgctaaccctcttaaggagaaggtgcgtctgcgctataagctgatgtttctcctcggc
gagagacaatactgtgaagtgggagaactggatcagtttcctccaccagagagatgggga
aacctgtag
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