Tachysurus vachellii: 132842646
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Entry
132842646 CDS
T09596
Symbol
rangap1a
Name
(RefSeq) ran GTPase-activating protein 1a
KO
K14319
Ran GTPase-activating protein 1
Organism
tvc
Tachysurus vachellii
Pathway
tvc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132842646 (rangap1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvc03019
]
132842646 (rangap1a)
Messenger RNA biogenesis [BR:
tvc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132842646 (rangap1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_NLRC3
LRR_6
LRR_TMOD-LMOD
LRR_CARMIL
LRR_NLRC4
LRR_4
SDA1_dom
BUD22
SMR_1-15
PI3K_1B_p101
Tim54
Motif
Other DBs
NCBI-GeneID:
132842646
NCBI-ProteinID:
XP_060721418
LinkDB
All DBs
Position
3:complement(4704487..4715605)
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AA seq
585 aa
AA seq
DB search
MASDVVAQLADSLARTQVGEGELSYKGQGLKLDNAVSVEEMVKAIREFEGLRALRLEGNT
FGVEAAQAIAKALEDKRDFQCCYWSDMFTGRLRSEIPPALTSLGAALISAGARLKVLDLS
DNAFGPDGVRGIETLLKSSACHTLQELRLNNCGMGIGGGKILAAALTQCHKESSKLGTPL
RLKVFIAGRNRLENDGATALAQAFQLIGSLEEIHMPQNGINHPGVTALADAVQHNLLLRV
LNLNDNTFTKKGAVAMAQALKHLRSVQVINFGDCLVRSEGALALAETLKDGLPILKELNL
SFGEIAEEAALEVAKAVKHKDQLEKLDLNGNCIGEEGCENLRELMQNMNMGDLLASLSDD
EGEPEDDYDDGEDDEEEEEDDEDENKEEEEDEEDEDEEEDDEEDGEDEPSSLTQISTPPS
APRPPDVSSFLCFPSPEKLLRLGDQRVQLLQKQVDVTDVSKTVEAFLKISSVHKERDPDV
KTAVLESVDAVLSKAFSTPSVQTFSFISALLVMLGLLKSEDKLKPVPVVPGHLQCLEHAV
QQKYFPKEHIVVLHAFLSRQNKSLDSCISARDSLRTTLQRLLPES
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagacgttgtggcccagctggccgactctctggctcggactcaggtgggagaa
ggagaactgagctataagggacagggactgaagctggacaacgctgtgtctgtggaggag
atggtgaaggcgattcgggagtttgaagggctgcgagctctgcgtttggagggaaacacg
tttggagtggaagcagcacaggccatcgcaaaggcactggaggacaagcgagactttcag
tgttgttactggagtgatatgttcaccggtcgcctgcgttcagagatccctcctgctctg
acatctcttggtgcggctctgatatccgccggcgctcggttaaaggtgctcgatctgagc
gataacgcgttcggacccgatggcgtgagaggcatcgagactctgttgaagagctcagcg
tgtcacacactgcaggagctgaggcttaacaactgcggcatgggcatcgggggcggaaag
atcctggcagcggccctgacgcagtgccacaaagagtccagtaaactcggcactcctctg
aggctgaaggtcttcatcgcagggaggaacaggctggagaacgacggagccacggcgctg
gctcaagccttccaattgatcggcagcctggaggagatccacatgcctcagaatggcatc
aaccaccccggagtgacggctctcgccgacgccgtgcagcacaacctcctgcttcgagta
ctcaacctcaacgacaacaccttcaccaagaaaggagccgttgccatggcgcaggccctg
aagcacctccgcagcgtgcaggtgataaactttggcgactgtttggttcgctctgaagga
gccttagccttagccgagactctgaaagacggccttccgattctcaaggagctgaatctg
tcgttcggggagatcgcagaagaagcagctctggaagtcgctaaagcagtgaagcacaaa
gaccagctggagaaactcgacctcaatggtaactgtattggtgaggaagggtgtgaaaac
ctccgggagctcatgcagaacatgaacatgggagacctactggcctctctgagcgacgac
gaaggagagccggaggatgactacgatgatggcgaagatgatgaagaggaggaggaagat
gatgaggacgagaacaaggaggaggaagaggacgaggaagatgaggacgaggaggaggac
gacgaggaagacggagaagacgagcccagctctctcacacagatatcgactccaccttca
gcccctcgtcctccagacgtctcgtccttcctctgtttcccgtctccagaaaaactactg
cggctcggtgaccagagagtccaactgctccagaaacaggtggacgtgacagatgtgagt
aagactgtagaagccttcctgaagatctcgtccgtgcataaggagcgtgatcctgacgtg
aagacagcagtgctggagagtgttgatgctgttttgagtaaagccttttcaactccatca
gtccagacatttagtttcatctctgcgttactagtgatgcttggtctattaaagagtgag
gacaaattaaaacccgtgccggtcgtaccaggtcacctgcagtgtttggagcacgcggtg
cagcagaagtatttccctaaagagcacattgttgtgctgcatgcctttttgtccagacaa
aacaagtccttggactcatgcatcagcgctcgagacagccttcgcaccactctgcagaga
ctgctgcctgagagctaa
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