Tachysurus vachellii: 132842781
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Entry
132842781 CDS
T09596
Symbol
hdac1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
tvc
Tachysurus vachellii
Pathway
tvc03082
ATP-dependent chromatin remodeling
tvc03083
Polycomb repressive complex
tvc04110
Cell cycle
tvc04330
Notch signaling pathway
tvc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132842781 (hdac1)
03083 Polycomb repressive complex
132842781 (hdac1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132842781 (hdac1)
04350 TGF-beta signaling pathway
132842781 (hdac1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132842781 (hdac1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvc03036
]
132842781 (hdac1)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
132842781 (hdac1)
Chromosome and associated proteins [BR:
tvc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
132842781 (hdac1)
HDAC complexes
Sin3A-HDAC complex
132842781 (hdac1)
BRAF-HDAC complex
132842781 (hdac1)
REST complex
132842781 (hdac1)
SHIP complex
132842781 (hdac1)
MiDAC complex
132842781 (hdac1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
132842781 (hdac1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
132842781 (hdac1)
Chromatin remodeling factors
NuRD complex
132842781 (hdac1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
132842781
NCBI-ProteinID:
XP_060721621
LinkDB
All DBs
Position
3:8665546..8675108
Genome browser
AA seq
480 aa
AA seq
DB search
MALTSQGTKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
NAEEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEA
IFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLG
GGGYTIRNVARCWTYETAVALDSTIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNDYL
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEDDPDKRIPIRAHDKRIACDEEF
SDSEDEGQGGRRNAASYKKTKRVKTEEEKDGEEKKDVKEEEKTPEEKMDTKGPKEELKTT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgacttcccaaggaacaaagaagaaagtttgctattattatgacggtgatgtt
gggaattattactacggccagggtcaccccatgaaacctcaccgcatccgcatgacccac
aacctccttcttaactatggcctgtataggaagatggagatctataggcctcacaaagcc
aatgccgaagagatgacgaaataccacagtgacgactacatcaagttcctccgctccatc
cgcccagataacatgtcagagtacagcaagcaaatgcagagatttaatgttggtgaagat
tgtcctgtgtttgatggcctgtttgagttctgtcagctttcaacaggcggctctgtcgcg
ggcgctgtgaaactaaacaagcagcagacagacatcgccattaactgggcgggcggcctt
catcatgccaagaaatcggaggcgtctggtttctgctacgttaacgacattgtgctggcc
atcctggaactgctcaagtaccatcaaagagttctgtatattgacattgacatccaccac
ggtgatggagtagaggaggctttctacactacagaccgtgtcatgaccgtgtcgttccat
aagtatggagagtactttcctggcacaggtgacctccgagacattggtgctggaaagggg
aagtactacgcggtgaactacccactcagggacgggatcgatgacgagtcttatgaagcc
atattcaaacccatcatggctaaagtgatggagatgtaccagccaagtgctgtagtgctt
cagtgtggtgctgactctctgtctggagacaggctgggctgcttcaacctcactattaaa
ggtcatgctaagtgtgtggagtacatgaagagctttaacctgcccttgctcatgctgggt
ggtggaggctacaccatcagaaacgtggctcgctgctggacctacgagaccgccgtcgcc
ctggacagcactattcctaatgagcttccatacaacgactactttgaatattttggaccc
gactttaagctccacatcagtccctcgaacatgaccaatcagaacacaaatgactaccta
gaaaagatcaagcagcgtctgttcgagaacctgcgcatgcttcctcacgctcccggtgtg
cagatgcaggcgatcccagaggacgctgtgcaggaggacagcggggacgaggaggacgac
ccagacaaacgcattcccatccgtgcccacgacaagaggatagcctgcgacgaagagttc
tccgattccgaggatgaaggacaaggtggccgcagaaacgcagccagctacaagaagacc
aagagagtgaagaccgaggaggagaaagatggggaagagaagaaagatgtgaaggaggag
gagaaaaccccggaagagaaaatggacacaaaagggccaaaagaagagctgaaaacaacc
tga
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