KEGG   Tachysurus vachellii: 132842909
Entry
132842909         CDS       T09596                                 
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
  KO
K17936  sorting nexin-27
Organism
tvc  Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tvc04131]
    132842909 (snx27a)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:tvc04990]
    132842909 (snx27a)
Membrane trafficking [BR:tvc04131]
 Protein recycling
  Others
   Others
    132842909 (snx27a)
Domain-containing proteins not elsewhere classified [BR:tvc04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   132842909 (snx27a)
SSDB
Motif
Pfam: PX PDZ RA PDZ_6 SNX17-27-31_F1_FERM RA_2 VirE3 SNX17_FERM_C PDZ_2 SNX17-31_F2_FERM USP7_C2 DarA_N
Other DBs
NCBI-GeneID: 132842909
NCBI-ProteinID: XP_060721863
LinkDB
Position
3:14461499..14485410
AA seq 557 aa
MADVEGDDDRGAPTCPVTLSTASRHDSGGQTVTAGPRIVRIIKSESGYGFNVRGQVSEGG
QLRSINGELYAPLQHVSAVLPGGAAHRAGVLKGDRILEVNGVSVEGATHKQVVDLIRTGE
KELVLAVLSVPPQEVDGLDSGEDGSAPLSYDYSDKQAVPISIPTYKHVEQHGERFVVYNI
YLSGRQLCSKRYREFSILHQNMKREFASYPFPKLPGKWPFSLSDQQLDARRRGLEEYLEK
VCSVRIIGESDIMQEFLSESDENYNGVTDVELRIAMPDKTTISVRVRKNCTTDQVYQALV
MKVGIDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLFSVE
EQELLQENPLALHYCFHQAQDDVKKGFIKAEEKSYQLQKLAEQRKMATYLNLLRTCEGYN
EVAFPHCPCDSRRRGHVIAAVSIHHFKLHACTEDGTLENQVIVFEWSEMQRWDTDEEGMA
FCFEYVRGEKKPRWVKIFTPYFNYMHECFERIFYELSWRKEVEEEASDKDNKNCNEYLPP
LEQQKRWHHLGKEIATT
NT seq 1674 nt   +upstreamnt  +downstreamnt
atggcggacgtagaaggagatgatgatcgcggcgctccgacgtgcccggtaacgctgtcc
acggcgtctcgacacgactccgggggacagaccgtgacggcgggaccacgtatcgttcgg
attattaaatcggagtcgggctacgggtttaacgtccgcgggcaggtcagcgaaggcggc
cagctgcgcagcattaacggggagctgtacgcgcctctgcagcacgtcagcgccgtgtta
cccgggggggcggcacacagggcaggagtactgaaaggagaccggatactagaggtgaat
ggcgtgagtgtggaaggcgctacacataagcaagtggtagacctgatccggacaggagag
aaagagctggtgctcgctgttctgtctgttccaccacaagaagtagatggactggactct
ggagaggacggttcagctcccctcagttatgactacagtgacaagcaggctgtgcccatc
tccatccccacctacaagcacgtggagcagcacggagaaagatttgttgtatataatatc
tatctatctggcagacagctgtgctcaaagcgctaccgggagttttctattctgcaccag
aacatgaagagagagtttgcctcgtacccatttcccaaactcccagggaaatggcctttc
tctctctctgaccaacagctagatgcccgtaggagaggcctggaggaatacttggagaaa
gtgtgttcagtgaggatcattggagagagtgacattatgcaagagttcctctcggagtca
gatgagaactataacggtgtaactgacgtagagttgcgaatagcgatgccagataagacc
accatttcagtgagagtgcgcaaaaactgcaccactgatcaagtgtaccaggccctagtg
atgaaggttggaatagacagcatcatggccagttactttgccctttttgaagtgatcaac
cactcctttgttcgtaagttggcccctaacgagttcccccacaagctgtatgtgcagaac
tacacgtctgcggtgccggggacctgtctggcgctgcggaagtggcttttcagcgtagaa
gagcaagagcttctccaggaaaatcctctagctctccattactgcttccaccaggcgcag
gacgatgtgaagaagggattcatcaaagcagaggaaaagtcctatcagcttcagaagtta
gcggagcagagaaagatggctacgtacctgaatttgctccgcacatgtgagggctataat
gaagtagcgtttccccattgcccatgtgactcacggaggagaggtcatgtgattgccgct
gtcagcattcaccatttcaaacttcacgcttgcactgaggatggcacactggagaaccag
gttatagttttcgaatggtctgagatgcagaggtgggacacagacgaggagggaatggct
ttctgctttgaatatgtacgaggggagaaaaagcctcgctgggtcaagatctttactcct
tattttaactacatgcacgagtgctttgagaggattttctatgagctcagctggaggaaa
gaggtggaagaggaggcttcagacaaagacaacaagaattgcaatgagtacctccctcca
ctggaacagcagaagcgatggcaccacctagggaaagaaattgccaccacttag

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