Tachysurus vachellii: 132842951
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Entry
132842951 CDS
T09596
Symbol
ctdp1
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase isoform X1
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tvc01009
]
132842951 (ctdp1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvc03021
]
132842951 (ctdp1)
Enzymes [BR:
tvc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
132842951 (ctdp1)
Protein phosphatases and associated proteins [BR:
tvc01009
]
HAD phosphatases
Fcp/Scp phosphatases
132842951 (ctdp1)
Transcription machinery [BR:
tvc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
132842951 (ctdp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FCP1_C
BSH_Fcp1
NIF
PTCB-BRCT
BRCT
Biotin_lipoyl
RTT107_BRCT_5
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
132842951
NCBI-ProteinID:
XP_060721947
LinkDB
All DBs
Position
3:15400224..15412567
Genome browser
AA seq
925 aa
AA seq
DB search
MEVTEIRLPAAARAVRLREWKVELGAVVKVDSVLALCVLMPTDTEGQQHNNRALTEKKLK
SDRAGVVTELCYGLGDVICPGDVIARIEECSHPIVMKGLCAECGQDLTQLQNRNGKQQNI
STAMVSMVHSVPELMVSSEQAEQLGREDQKRLHRNRKLVLMVDLDQTLIHTTEQHCQHMS
TKVSFITTTIEGIFHFQLGRGEPMLHTRLRPYCKEFLEKISKMYELHVFTFGSRLYAHTI
AGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPNLIT
VKKYVYFKGTGDINAPPGSREAQREKKSAGNQVSQPVENPNPSGSSADEGKNNVHRKPDK
DKKSPHDEMSTAVADVQGESASQRTSPDANRTEKSLSDNICDVKVDDSGDSDGTRQSETG
DQDNVTVAGSGDSTKPGSPQNKNDKVLESTESQQTSVDEECCGTEENGEGGLDAGSVCDM
DEESLGDNGCSDKKETETESQNSEQSGVTMGEESLDHSMVDEEEEEEDMDQDDHLIYLQE
ILLRIHNEYYSRYDAYLRGDCSDTPDIRKIIPELKSSSLAGTNIVFSGLYPTNYPMERTR
ESYHAKALGAKISKSLVLSAKDPDLTTHLIAARAGTEKVRQAQACKHVHVVNPDWLWGCL
ERWERVEEQLFPLKEDYIKSQRSNSPSAFPDVQESFPAPVIDPVFIQPKGLLPPEVHTYD
SVTGKLIRRGPQAPRQSQKSSVMSSGHEVHLNFRDLRFLQQEDIDSSRADDEQPGPIRRK
RQPSLSESLPLYTLCKEDLDSMDREVDDILEEESDNDSEGKEKEERVKEDEEDEESSRQS
AEAADDHQALNMSVKDTSSTSKEDSSQTGITPRGHKRKLQDTREDDDDKDGDFASQSSKE
SNEDGSSSEADEMAAALEAELNDFM
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacggagatccggctgccggcggcagcgcgtgcggtgcggctgagggagtgg
aaggtggagctcggggcggtggtgaaggtggattctgtgctagctttgtgtgtgctgatg
cctacagacaccgaggggcaacagcacaacaacagggcactaacggagaagaagctgaag
tctgaccgagctggggtggtgacagagctgtgttatgggctgggagacgtcatatgtcca
ggggacgttattgcacgaatagaagaatgcagtcatcccattgtaatgaaggggctgtgt
gctgagtgtggtcaggacttaacacagctgcagaacaggaatgggaagcagcagaacatc
tctactgccatggtctccatggtccacagtgtcccagagctgatggtcagctctgagcaa
gctgagcagcttggtcgagaagaccagaagaggctccacagaaacaggaagctggttctc
atggtagatctggaccagactctgatccacaccacagagcagcactgtcaacacatgtca
accaaagtgagcttcataaccacaacaatcgaagggatttttcatttccagctgggcaga
ggtgagcccatgctgcacacacgtctcaggccttactgcaaagagtttctggagaagatt
tccaagatgtatgagctgcatgtgtttactttcggaagtcgcctctatgcacacaccatt
gcaggcttcttggaccctgaaaagaaacttttctcacatcgaatcctgtccagagatgag
tgcattgacccgttctccaagacaggaaacctgaggaatttgttcccatgtggcgactcc
atggtgtgcatcatcgacgatagagaggatgtgtggaagtttgcccctaacctcatcacg
gtgaagaaatacgtctacttcaagggaacaggtgacatcaacgctccgcccgggtcacga
gaggctcagcgggaaaaaaaaagtgcaggtaaccaggtcagtcaacccgtagagaacccc
aacccgtctggatcatcagctgacgaggggaaaaataacgtccaccggaaaccggacaag
gataaaaagtcaccacatgacgaaatgtcaaccgctgtcgctgacgttcaaggagaatca
gctagccagagaacttctcctgatgcaaacaggacagaaaagtcactttcggataatata
tgtgacgttaaagtagacgattcaggtgattcggatgggacaaggcaaagtgaaactgga
gatcaagacaatgtgactgtagctggtagcggtgactcaactaaaccgggatcaccgcag
aataaaaacgataaggtcttagaaagcacagaaagtcaacaaacaagcgtagacgaggag
tgttgtggtacagaggaaaacggagagggaggattagacgctggcagcgtctgcgatatg
gacgaagagagcctcggtgataacggatgttctgacaagaaggaaaccgagaccgagtct
caaaacagcgagcagtccggtgtcaccatgggagaggagtctttagaccacagcatggtg
gacgaggaggaggaggaggaagacatggaccaggacgatcacttgatttacctccaggag
atcttgctgcgtattcacaacgagtattactcccgctacgacgcgtatctccggggtgac
tgctccgacacgccggacatccgtaaaatcatccctgagctgaagagcagctctctggca
ggcacaaacatcgtgttcagcggcttgtaccccacaaactaccccatggagcgaacacga
gagagctaccatgcaaaagcactgggtgccaagattagcaagagccttgtgctcagtgcc
aaagatcccgacctcaccacccacctcatcgcagctcgtgcaggtacggagaaggtccgg
caggcccaggcctgtaaacatgttcatgtagtgaatccagattggctttggggatgtctg
gagcgatgggaaagagtggaagagcagctgttccctcttaaggaggactacataaaatca
cagagaagtaatagcccatcagcatttcctgatgttcaggagtccttcccagcacctgtt
attgaccctgttttcatccagcccaaaggcctgctgcctccagaggtgcacacgtacgac
tcggtaactgggaagttgatccgaagaggacctcaggcaccacgtcagtctcaaaaatca
tcggtgatgtcgtcaggacacgaagtgcacttaaactttagggatttgagatttctgcag
caggaagatattgacagctccagagcagatgacgagcagcctggaccgatacgcaggaaa
cgacagcccagcctgtccgaatccttgccgctctacacgctctgcaaggaggacctagac
agcatggaccgagaggtggatgatattcttgaagaagaaagtgataatgacagtgaggga
aaagagaaggaggagagagtgaaggaagatgaggaggatgaggagagcagtagacaaagt
gctgaagcagcagatgatcaccaggccctaaacatgtctgtcaaagacacatcatcaaca
tccaaagaagacagcagtcagaccgggatcacaccaagaggtcacaagagaaagctgcag
gacaccagagaagacgatgatgacaaagacggagactttgctagccagtccagtaaggag
tcaaacgaggacggtagtagctcagaagctgatgagatggctgctgctctggaggcagag
ttaaatgacttcatgtga
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