Tachysurus vachellii: 132842954
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Entry
132842954 CDS
T09596
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
tvc
Tachysurus vachellii
Pathway
tvc03320
PPAR signaling pathway
tvc04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
132842954 (rxrba)
03320 PPAR signaling pathway
132842954 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132842954 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tvc03310
]
132842954 (rxrba)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
132842954 (rxrba)
Nuclear receptors [BR:
tvc03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
132842954 (rxrba)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
132842954
NCBI-ProteinID:
XP_060721952
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All DBs
Position
3:15436391..15448489
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AA seq
463 aa
AA seq
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MGDNRDSRSPDSSSVSSPPSGKQSPALLPSAAAMTSLPPVTSAVSSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPFGLKPLLGHSPGPTLS
QKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCMVDKRQRNRCQYC
RYQKCLAMGMKREAVQEERQRNKEREGEVESTSAVNEEMPVEKILEAEMAVEQKIELHSD
GSSGTSSENDPVTNICQAADKQLFTLVEWAKRIPHFSELALDDQVILLRAGWNELLIASF
SHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESTHNAEVGAIFDRVLTELVSKMRD
MQMDKTELGCLRAIILFNPDAKGLSNPSEVELLREKVYAALEAYCKQRYPDQQGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaacagagattctcgcagtccagacagctcttctgtgtcgtcaccaccttca
gggaaacaatcacctgcactgcttccctcagcagctgctatgacctcactgccacccgtt
acttcagcagtcagcagtcctattagcagcatgggctcccccttttctgtcatcagctcg
tctctcggttccccgtgtctccctgggacaccgtcagtgggttacggccccatcagcagt
ccccagatcaactccactgtgtccatgtccggcctgcacgccgtcagcagttcagacgac
gtaaagccgccgtttggcctgaagccgcttttaggccacagccccggacccaccctctct
cagaaacggctctgtgccatttgtggcgatcgctcctccggaaagcactacggcgtgtac
agctgtgagggctgtaaaggcttttttaaacgcacagtcagaaaagacttgagctacacg
tgcagagacaacaaggactgtatggtggacaagcgtcagaggaatcgctgccagtactgc
cgctaccagaaatgtctagccatggggatgaagagagaagctgttcaggaggagcgtcag
aggaataaagagcgagaaggagaagtggagtctaccagtgcggtgaatgaagaaatgcca
gtggaaaagatcctggaagcggagatggctgtggagcagaagatcgagctgcattccgat
ggaagttcaggcaccagctctgaaaacgatcccgtcacgaacatctgccaggcagctgat
aaacagctcttcactctggtggagtgggccaagagaatcccgcacttctcagagctggct
ctcgacgatcaggtcatccttctgcgtgctggttggaacgagctgctgatcgcctcgttc
tctcatcgctcaatcactgtgaaggatggcatattactggccactggactccacgtgcac
agaaacagtgcacatagcgcaggagtgggagccatctttgatagggagagtacgcacaat
gcagaggttggggccatatttgacagggtgctgactgaactagtgagtaagatgagggac
atgcagatggataagactgagttgggatgtctaagagccatcatccttttcaacccagat
gcaaaggggctgtcaaacccaagtgaagtggagttactgagagagaaagtctatgctgca
ctagaagcttattgtaaacagagatatcctgaccagcagggcaggttcgccaagctcctc
ctccgactgccagcgttgcgctccatcgggttgaaatgcctggagcacctgttcttcttc
aagctgattggcgacacccccatcgacaccttcctcatggagatgctggaagctccccat
cagctgacctaa
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