Tachysurus vachellii: 132843013
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Entry
132843013 CDS
T09596
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvc03000
]
132843013 (sox6)
Transcription factors [BR:
tvc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132843013 (sox6)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
AAR2
Motif
Other DBs
NCBI-GeneID:
132843013
NCBI-ProteinID:
XP_060722073
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All DBs
Position
1:complement(40543261..40719295)
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AA seq
805 aa
AA seq
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MPSSAEVVSVGEERGPVAEEDRLRIMSSKQATSPFASGADLGEDGAGQERLVWEKDEGTE
PLAAPQLPIHNLLHGKMHGEELPPVSSSVPPESDWDSLVSAQQRMESDSNKVCSLYSFRN
NSTSPHKPEEGARERGDLLGASAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDETSCM
EKLLSKDWKEKMERLNTSELLGEIQGTPESLAEKERQLSTMITQLISLREQLLAAHDEQK
KLAASQMEKQRQQMELARQQQEQIARQQQQLLQQQHKINLLQQQIQQVQGHMPPLMIPIF
PHDQRTLAAAAAAQQGFLFPPGMSYKPGDNYPVQFIPSTMAAAAASGLNPLQLQQLYAAQ
LASMQLSPGAKMAPLPQPPNSAGPLSPGPKSEKRSSSPLGQVKEEGTQPLNLSARPKTAE
PVKSPLSPTHSLFSGSKNSPNSQPKSGGIPSPLGLGRGSSLDILSNLNSTALFGDQDAVM
KAIQEARKMREQIQREQLQHHQQGMEAKLSALSGLGLNNCRADKERVHFESLGHHLGKLG
DDGKIGQRVIDLTRPEDLDGSKELNGSAEKPQQYYCWPTGGASTTEARVFRESRGRNPNE
PHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLS
KIHLEKYPNYKYKPRPKRTCIIDGKKLRIGEYKQMMRSRRQEMRQFFTVGQQPQTQLPIS
SSAGVVYPGAISMTSDCSSNSASPEPTVPVIQSTFGMKTEPSMPSVVPSEPVNGEDDMDM
YEDFEDEPKSDYSSENEVQEPVSAN
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgccatccagtgctgaagtggtgagcgtcggagaggaaagagggccagtggctgaggag
gacagactcagaatcatgtcttccaaacaagccacctctccgtttgcctcgggtgcagat
ttgggtgaggacggagcgggtcaggagcgcctggtttgggagaaggacgaaggcacggag
ccgctggcagcaccgcagctgcccattcacaacctgctgcacggcaagatgcacggcgag
gaactgcctcccgtcagcagcagcgtgccgcccgaatctgactgggacagcctggtgtcg
gcccaacagcgcatggagtcagacagcaataaagtatgttccctctactccttccggaat
aactctacctctccgcacaagccggaggagggggcacgggagcgaggcgacctgctggga
gcctccgccttcggaacgccggagcgtcgcaaagggagcctggccgacgtggtggacacg
ctgaagcagaagaagctggaggagatgacaaagacagagcaagacgaaacttcatgcatg
gaaaaactgctttctaaagactggaaagagaaaatggagagactgaacacgagcgagctt
ttgggagaaatacaaggtactccagaaagtctggctgagaaagagaggcagctttcaacg
atgatcacgcagctgatcagcctgagagagcagctcctggctgcccacgacgagcagaag
aagctggcggcctcacagatggagaagcagaggcagcaaatggagctggctcgacagcaa
caagaacaaatcgccaggcagcagcagcaacttcttcagcagcagcacaaaatcaatctc
ctgcagcagcagattcagcaggtccagggtcacatgcctcctctcatgatccccattttt
ccacacgaccagcgcacactggccgccgccgccgccgcccagcagggcttcctcttccct
ccaggcatgtcctacaagccaggtgataactacccggtgcagttcattccttccacaatg
gcagctgccgccgcgtcaggactcaatcctcttcagctccagcaactgtacgcagcccag
ctggccagtatgcagctctctccaggagcaaagatggcaccactgccccagccacctaat
tctgcagggccactatcacctggacccaagagtgagaagaggtcctccagcccactgggc
caagtcaaggaggagggaacgcagcccttgaacctctcggcccggcctaagacggccgag
ccagtaaaatcccccttgtccccgacacacagcctgttctcaggcagcaagaacagtcct
aatagccagcccaagagcggaggaatcccgagtcctctcggtctgggtcgaggatcatcc
ctcgatatcttgtctaacctgaactctacggcactatttggagaccaggatgctgtaatg
aaggccatccaggaggcgaggaaaatgagggagcagatccaacgtgagcagctgcagcat
caccaacagggcatggaggctaaactctcggctctctcaggcctcggtcttaacaactgc
agagctgacaaggaacgggttcactttgaaagcttgggacatcatctgggaaaactagga
gatgacgggaagatcggtcagagagtcatcgatctgaccaggccggaggatctggatggg
agtaaggagctgaatggttctgcagaaaaaccacaacagtattattgttggccaacagga
ggcgccagcaccactgaagcccgggtgttcagagaatcgcgaggacggaacccaaatgag
ccgcacatcaagcgacccatgaacgccttcatggtgtgggccaaagacgagcggcgcaaa
atcctgcaggctttcccggacatgcacaactccaacatcagcaaaatcctgggttctcgc
tggaagtccatgtccaaccaggagaagcagccgtactacgaggaacaggctcgtctgagc
aagatccacctggagaagtaccccaactacaagtacaagcctcggcccaagcgcacgtgc
atcatcgacggcaagaagctgcgcatcggcgagtacaagcagatgatgcgctcgcggagg
caggaaatgcgccagttcttcacagtagggcagcagccccagactcagctcccgatcagc
agcagcgcgggcgtcgtctaccccggagccatcagcatgacctcggactgctcgagcaac
tcggccagtcccgagcccaccgtccccgtcatccagagcaccttcggcatgaagacggag
cccagcatgcccagcgtggtgccaagcgaaccggtcaacggcgaggacgacatggacatg
tatgaggacttcgaggacgaacccaaatcggactacagcagcgagaacgaggtgcaggag
cccgtcagcgccaactga
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