Tachysurus vachellii: 132843038
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Entry
132843038 CDS
T09596
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tvc
Tachysurus vachellii
Pathway
tvc04140
Autophagy - animal
tvc04148
Efferocytosis
tvc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132843038 (vps18)
04148 Efferocytosis
132843038 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
132843038 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvc04131
]
132843038 (vps18)
Membrane trafficking [BR:
tvc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
132843038 (vps18)
Hops complex
132843038 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_16
zf-RING_Vps41
zf-C3HC4_2
zf_RING_Vps8
zf-RING_5
zf-RING_11
zf-ANAPC11
DUF2175
zf-RING_UBOX
zf-rbx1
DUF5600
zf-C3H2C3
KNOX2
zf-RING_2
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
132843038
NCBI-ProteinID:
XP_060722071
LinkDB
All DBs
Position
3:complement(17867974..17874701)
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AA seq
978 aa
AA seq
DB search
MATILDDYEDSQLIRHTVQPGRLPAANMIGITHSGFVNVRLEEEKPIFNKQRIDFTPPEK
INHFAVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDCKVHKLFLDPTGSHLVISL
TTSECVYLNRNTQKVRSLSRWRGHLIESVGWNKILGNETNTGPILVGTSQGIIFEAEISA
SEGSLFNTNPDQYFRQVHSLEEDGKPAPVCCLDVERGIESKYFIIATTRKRLFQFVGKLA
EGSEQQGFSSIFAQNQDILPSFQEFPVNMGYSEIGFYTSKLRSSPNSFAWMMGNGVLYGH
LDYSRPDSLLTDVQVWEYTPDIDFSYNKPISIVLTQFHFLLLLPDRVKAICTLNGQVVYE
DIFPDKYGLLKKIIKDPVGGLVWIYTEKAVFRYHIQRESRDVWQMYMNMKKFDLAKEYCK
DRPECKDMVLAKEAEHWFQNKHYLESAKCYALTQNYFEEIALKFIEAKQEEALKEFLLRK
LNNLKPGEKTQITLLVTWLTELYLNRLGQLEADEENSARFKEMREEFRRFLCSSKHKECF
YNNRSTIYDLLASHGNVDDMVYFSVIMQDYERVISHYCQHDDYAAALDVLSKHCDEKLFY
KFSPVLMQHIPKQVVDAWIHMGGRLDPKQLIPALVNYSQIGSTQQINETIRYMEFCVNEL
SVKDEAIHNYLLSLYAKYKPDSLLWYLEQAGTHASEIHYDLKYALRLCAEHGYLQACVLV
YRIMELYEEAVDLALKVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNC
LSSCNLLKIEDILPFFPDFVTIDHFKEAICLSLDEYHHHIEELKQEMEEATESARRIRQD
IQEMRNKYGVVESQEKCATCDFPLLNRPFYLFLCGHMFHYDCLFQEVTPHLSAYKQSKLE
ELQKKLAATTQTTKSRHRPKEEDTVSLGKGQGSREQMKSDIDDIVASECAYCGELMIKSI
DKPFIDPHRFEEEMSSWL
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcaactattctggatgattatgaagactctcagctgatcagacacacggttcaacct
ggacgacttcctgcggccaacatgatcgggataacgcactcaggatttgtgaacgtgagg
ctggaggaagaaaagccaatcttcaacaagcagcggattgacttcacacctcctgagaag
atcaatcactttgccgtgtgcaacaaccagctctgtatgagtctggggaaggacacattg
ctcaggattgatctggggaaacccgatcagccgaaccagatcgagctgggaaggaaggac
gattgtaaagtacataaactttttctggatccgacaggatctcacttggtgattagtctg
accacgagcgagtgcgtctacctgaacagaaacactcagaaggttcgcagcctctccaga
tggagggggcacttaatagagagtgtgggctggaacaagattttaggcaacgaaacaaac
accggaccgattctggtcggaacgagccagggtataatttttgaggcagagatctctgct
tcagagggttcgctctttaacaccaacccagaccagtacttcaggcaggttcattccttg
gaagaggacggaaagccggcgccggtctgctgcctagatgtggaacgtgggatcgagtcg
aagtacttcatcatcgccaccacccgcaaacggctctttcagttcgtcggcaagttagcc
gaaggttcggagcagcaaggctttagctcaatcttcgctcagaatcaggatatcttaccc
agctttcaggagtttcccgttaacatgggctacagtgagatcggcttctacacctccaag
ctccgctccagccctaactccttcgcttggatgatgggaaacggggttctgtacggtcac
ctggactactctcggcccgactctcttctcaccgacgtccaggtctgggaatacacacca
gacatcgacttcagctacaacaagcccatctccatcgtgctcacccaatttcatttcctg
ctcctgctcccagatcgcgtcaaggccatatgcaccttgaacgggcaagtagtctacgaa
gacatcttccccgataagtacggcctcctcaaaaagataatcaaagatcccgtcggcgga
ctggtctggatctacaccgagaaagccgtcttccggtaccacatccagagggagtccaga
gacgtctggcagatgtacatgaacatgaagaagtttgacctggccaaagagtactgtaag
gatcggccggagtgcaaggacatggtgctcgccaaggaagcggagcactggttccagaac
aagcattatcttgagagtgcaaagtgctatgcgctgactcagaactactttgaagagatt
gcgctgaagttcatcgaagccaagcaagaagaagctctgaaggaattcctcctgcggaaa
ctgaacaaccttaaacccggagagaagacccagatcacgctcctggtcacctggttgacc
gagttgtacctcaaccgtctcgggcaactggaggcggacgaggaaaacagtgcccggttt
aaggagatgcgtgaggaattccgtcgcttcctgtgtagcagcaagcacaaggagtgcttc
tacaacaaccggagcaccatctatgacctcttggcaagccacggcaacgtagacgacatg
gtctatttctccgtcatcatgcaggactatgagagggtcatctctcactactgccagcac
gacgactacgccgcggcgcttgacgtcctctccaagcactgcgacgaaaagctcttctac
aagttctccccggtgctcatgcagcacattccaaagcaagtagtggacgcctggatccat
atgggcggccgactcgatcccaagcagctgatcccggcactggtgaactacagccagatt
ggcagcacgcagcagatcaacgagaccattcgctacatggagttctgcgtcaacgaactc
agcgtgaaggacgaagccatccacaattatctgctgtcgctctacgccaagtacaagccc
gattctttgctgtggtacctcgagcaggcgggaacgcatgcctcggagatccactacgac
ctgaaatacgccttacgcctctgtgctgaacacggctatctgcaagcctgcgtgctggtc
tacaggatcatggagctgtatgaagaagctgtggatttggccttgaaggttgatgtggat
ttggccaagtcgtgtgctgaccttcctgaggacgacgaggagctgaggaagaagctgtgg
ctgaaaatcgcccgtcacgtggttcaggaggagaaagacgtgaagaaagcgatgaactgt
ctgtccagctgcaacctgctaaagatcgaggacatcctgcctttcttcccggactttgtg
accatcgaccacttcaaggaggccatctgcctctcgctggatgagtaccaccatcacatc
gaggagctcaagcaggagatggaggaggccacagagagcgcacggcgcatccgccaggac
atccaggagatgaggaacaagtacggtgtggtggagtctcaggagaagtgcgccacctgt
gactttcccttactcaaccgacccttctatctcttcctgtgtggacacatgttccattac
gactgcctcttccaggaggtcacgccgcacctctcggcctacaagcagagcaagttggag
gagctgcagaagaagctcgctgccaccacccagaccaccaaatctcgccacagacccaag
gaagaggacaccgtgagcctggggaaaggccagggcagccgagagcagatgaaatcagac
atcgacgacattgtggcgtccgaatgcgcgtactgcggcgagctgatgatcaaatccatt
gataagcctttcatcgatccgcacagatttgaggaagaaatgtccagctggctctga
DBGET
integrated database retrieval system
