Tachysurus vachellii: 132843275
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Entry
132843275 CDS
T09596
Symbol
lrfn5b
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
tvc
Tachysurus vachellii
Brite
KEGG Orthology (KO) [BR:
tvc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tvc04990
]
132843275 (lrfn5b)
Domain-containing proteins not elsewhere classified [BR:
tvc04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
132843275 (lrfn5b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
ig
LRR_5
Ig_2
LRR_9
fn3
V-set
C2-set_2
DHU1_N
Sp38
Ig_5
Motif
Other DBs
NCBI-GeneID:
132843275
NCBI-ProteinID:
XP_060722453
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All DBs
Position
3:25840619..25847036
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AA seq
789 aa
AA seq
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METIFVYLMVMIMAVKAQKIQICPKRCFCQVLPPNLATLCDKKGLLFVPPDIDRHTVELR
LGDNFITTVKRKDFANMTKLVDLTLSRNTIGSITPHAFNDLENLRALHLDSNRLIRITND
TFSGMSKLHHLILNNNQLTYIHIGAFNDLLALEELDLSYNNLESAPWVAIQHMISLHTLS
LDHNMIDYIPEGTFSGLMKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGVLGPSSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLSGRYFWTVSEEEFLCEPPLITRHSQETR
ALEGQHVTLRCKARGDPDPVIHWIAPDGRLVSNSTRTVVHTDGTLDILISTVKDSGSFTC
VASNPSGEAQQTVQLFIIKLPHFTNDTSLVQEPDPGSSDIATSTKSGGDSGTAISNTKAG
QDKRVLISEITSSSAMVKFNLQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNILVNNL
AAGTSYDLCVLAIYDDAMTTLTATRVVGCVHFATEPQYLRCHFMQSQFLGGTIVVIIGGV
IVASVLSFIIFLIVRYRVCNQEGEDKGVELGEVRSQSRSEQLQVCGIIKSMSKQVLGVEM
DACRKVSPQLESVPTLGTTPGPLPSKPALPDCTVTTSAASHSWHPASPNTQRPMHAASHK
PTGPQKPDTQISVELDNTNKNNSAKARPKSAQIRVYSTTVIPVSRKVQLESSRYMTVPVG
CMRVSRRHSLNVDSCKQTSYGSFPQQTGSLRSKRSLSMSGGDLPQLDVSAKIHGKDSLSR
SEWVLESTL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggagaccatttttgtttatttgatggtcatgatcatggcagtaaaagcccagaagatc
caaatatgtcccaaacgttgtttttgccaagtgctgcctcccaacttagccaccttatgt
gacaaaaaggggctgctttttgttcccccagacattgacagacacacagtagaactgaga
cttggtgacaattttatcacaactgtcaaacggaaggactttgccaacatgaccaagctt
gtagacttgacactttccaggaacacaataggctctatcacacctcacgctttcaatgat
ctggagaacctgcgtgccctgcatttggacagtaaccgtctgatacgaatcacaaatgac
acctttagcggcatgtcaaagcttcatcatctcattctgaacaacaaccagctcacatat
attcacataggagcctttaacgacctcctggcccttgaagagcttgatctctcctacaat
aatctagaaagtgccccatgggtggccatccagcacatgattagtctgcacaccttaagt
ctggaccacaacatgatagactatatacctgagggcacattttcaggcctcatgaaactc
aaacgtctggatgtcacttccaacaagcttcagaagcttccacctgatccagtcttccag
cgtgcaggtgttttggccacatcaggtgttttgggtccatcatcatttgcattgagcttt
ggggggaacccattacgctgcaactgtgagttgctatggttgaggagactacggcgtgag
gatgacctggagacttgcgctgctcctcagcacctctctggacgttacttctggacagtg
tctgaagaggagttcctgtgtgagcctcccctcatcacacgtcattcccaggagacccgg
gcattagaaggccaacatgttactttgcgctgtaaagcacggggtgacccagatcctgtt
attcactggattgcccctgatggtagactagtgtctaactcaacccgaacagttgtgcac
actgatgggacattagatatcctcataagcacagtgaaagactctggatcgttcacatgt
gtggcatccaatccttcaggagaagcacagcagactgttcagctatttattatcaaactg
ccgcattttactaatgatacaagtttagtacaggagccagaccctggatcctcagatatt
gctacatccaccaaatcaggtggagacagtggcactgccattagcaacaccaaagctggg
caggataaacgggtgctgatttctgaaattacatcctcctctgctatggtgaaatttaac
ttacaacggaatataccagggattcgtatgttccaaatccagtacaatggcacttatgat
gactcgctagtctacagaatgatccccccaaccagtaaaaacatcctggtgaacaacttg
gcagctgggacatcgtatgacctctgtgttcttgcgatttacgatgacgctatgaccacg
ctgacggctacccgtgtggtggggtgtgttcactttgcaacagagccccagtacctccga
tgccacttcatgcaatcacagttccttggaggtaccattgttgtcatcattggaggtgtc
attgtggcctcagtcttgtctttcatcatcttccttattgtacgttatcgagtgtgcaac
caggagggagaggacaagggagtagagctaggagaagttcgttctcaatccaggagtgag
cagctgcaggtttgtggtatcatcaagtctatgtctaaacaggttctgggtgtggagatg
gatgcatgtcggaaagtttccccacagctggagtcagtgcccacattgggaactacacca
gggccattgccctctaaacctgcccttcctgactgcaccgttactacctctgctgccagt
cacagctggcatcctgcctcccccaacacccagcgtcccatgcatgctgcctcacacaaa
cctacaggccctcaaaaaccagacacacaaatcagtgtggagcttgacaacaccaacaaa
aacaactcagccaaggcacgtccaaaatctgcccaaatacgggtctattctaccacagtg
attccagtgtccagaaaggtacagctagagtcctcacgctacatgactgttccagtggga
tgtatgagagtgagtcgcagacactctttaaacgtagactcctgtaagcaaaccagctat
gggagtttcccacagcagactggcagccttcgctctaaacgcagtctgtccatgagtggt
ggagatcttccccagctggatgtttcagccaaaatccatggaaaagactcactgtcaagg
tcagaatgggttctagaaagcacactttaa
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